Vibrio splendidus: LTQ54_09240
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Entry
LTQ54_09240 CDS
T08240
Name
(GenBank) EAL domain-containing protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsl
Vibrio splendidus
Pathway
vsl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
LTQ54_09240
Enzymes [BR:
vsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LTQ54_09240
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Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
Motif
Other DBs
NCBI-ProteinID:
UOE85958
LinkDB
All DBs
Position
1:2027369..2029849
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AA seq
826 aa
AA seq
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MQSTSLLIQDIEQTQRELQKIDFHQHEDLLIQVFSSFEKGSVLAACQVIQATFPNARLIG
CSANHYISQGVILHQGLYLIVTRFDATSYTCGVVEYSKQPLLDSQSMWQQLECNTNTQSI
ICFADRLQINNRDLFSAFEQSRYSLPICGGASTITDNGRWVMLDGICYENAYVMLALHSV
ELATTKGYYTEWNPIGRTFRVTGAQDNRLAELDGMPVRDLYNRYLADGLEVPFEQLHNFP
LMVGDPKEQNIHLPLKVRDCGEIEFSGHFQIGDEVRFCYDHPSLTLEQIRLGVQQIASHK
PEQFFIYNCTSRIDFIDGNQEVEVFQKLADTYGVYCMGELYQERGQQRILHHSLTYLALR
EGEGKAVQPLETQPATNISPLFSLIRNALLDVDDMNNSMASKIQQQATALTASYRIDRRT
GLPNRSVLREKLSQMSSDSHLLALKVTTFGQINEKYGYRVGDKLLHDLSDYFQKALWQFF
DEGCQLYSIGIGEWAVVFDSWASQEHIHQRFSEFSDQTEHVNFEPMGLPDIDYLSVSICA
GVASRRDFPATSIDDLLLKAIEARRSAVSQNKHLVSAKTLIQLEKHRQEQLGWLSCVSRA
VLNQNIVACSQPIVSAHSHQVESYECLVRIEEDGQLIAPGKFLPIIEGTHLYTRLSRQMI
TRTFDFMSQRTDSFSINLAPQDFSNEKTILHLEQAIKKISHPQRIGLEVLETEQIQDYGR
LIEVCNHFRDLGVNIIVDDFGSGYSNIDEILKLEPQVIKLDGSLIRNIDKDKKQRKIAQQ
LVSLCQILNAKTVAEFVHNEQVCRIAEDMGVDYLQGYYFGQPQRLF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgacctctctcctgatacaagatatagagcaaacccagcgtgaattgcaaaag
atagattttcatcaacatgaagacctactgattcaggtgttttcttctttcgagaaaggt
tcggttttggctgcctgccaagtgattcaagcgacttttcctaatgctaggctgattggc
tgtagtgcaaaccactacatcagccaaggcgtcatcctgcatcaaggtctctatcttatt
gttacccgcttcgatgcgacctcttatacttgtggcgttgtcgaatacagcaagcaacca
ctattagatagtcaatcgatgtggcagcagcttgagtgcaataccaatactcaaagtatc
atctgtttcgccgatcgtttgcagataaacaaccgcgacttattttcagcgtttgaacaa
tcgagatattcattaccgatctgcggaggtgcatcgaccatcacagataatgggcgatgg
gtaatgctagatggcatttgctatgagaatgcttatgtgatgttggcgttgcacagtgtc
gagctcgcaaccaccaagggttattacaccgagtggaaccctattggccgcaccttccgt
gttactggtgctcaagataaccggttagctgaattggatggtatgcctgttcgcgatctt
tataatcgctaccttgctgatggcctcgaagtacctttcgagcaactgcataatttcccc
ttgatggtcggtgacccgaaagaacaaaacattcacttgccactcaaggtgagagattgt
ggagagatagaatttagtggtcattttcagattggtgatgaggtcaggttttgttacgac
catccttcactgaccttggagcagatccgactcggtgttcaacagattgcctctcataaa
ccggagcagttttttatctacaactgcacctctcgtatcgattttattgatggtaaccaa
gaagtagaagtcttccagaagctagcagacacctatggtgtgtactgcatgggagaactc
tatcaagagcgtggccaacaacgaatcctgcatcatagcctcacgtatctcgcgcttaga
gaaggtgaaggcaaggctgtacagccattagagacacaacccgcgaccaatatatcacct
ttgttttcattgattcgaaatgcactgcttgatgttgatgacatgaacaacagcatggcg
agtaagattcagcaacaagccaccgcattaacggcgagctaccgaattgatcgtcgcact
gggctacccaatagaagtgtactgcgtgagaagctgtcacaaatgagctctgacagtcat
ttgttggctttgaaggtcaccacatttggtcaaatcaatgagaagtatggttatcgagta
ggtgacaaacttctgcatgatctgagtgattactttcagaaagcgctgtggcagtttttt
gatgagggttgccagctctacagtattggtattggtgagtgggcggtggtgtttgatagt
tgggccagccaagaacacattcatcagcgtttctctgaattttcagaccaaaccgagcat
gtcaattttgagccgatggggctacccgatatcgattatctttcggtttcaatttgtgcg
ggtgtcgcgagtcgtcgagactttcctgcgacctcgattgatgacttgttactgaaagcg
attgaagctcgacgcagtgcggtgagccagaataaacatctggtgagtgccaagacgtta
attcaactcgagaagcatcgccaagagcaactcggctggctgtcgtgtgtgagccgcgca
gtgctcaatcaaaatattgttgcgtgctctcaacctattgtatcggcgcatagccaccag
gtagaaagctatgagtgcttagttcgaattgaagaggacggtcagttgattgcaccgggt
aagttcttgccgatcattgagggaactcatctctatacgcgtttaagtcgccagatgata
acgcgcacctttgattttatgagccagagaaccgattcgttctcaattaacttggcgcca
caagatttcagcaatgagaaaaccattcttcaccttgaacaagccatcaaaaaaatcagt
cacccacagcgtattggtttagaagtgttggaaaccgagcaaattcaggattacggccgc
ttgatcgaggtgtgtaatcacttccgcgatcttggtgtgaatattattgtcgatgacttt
ggttcgggctactcgaacattgatgagatattgaaactggaaccacaagtgataaagctt
gatggcagtttaattcgcaatatcgataaggataaaaagcaacgcaagatagcgcaacag
ctggtgagcttatgtcagattctgaatgctaagacggtggcggagttcgtacataatgaa
caggtgtgtcgtattgcagaagacatgggcgtcgattacctgcaagggtattactttggt
caacctcaacgcttattctga
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