Vibrio atlanticus: VS_0041
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Entry
VS_0041 CDS
T00812
Name
(GenBank) Fatty oxidation complex, alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp00071
Fatty acid degradation
vsp00280
Valine, leucine and isoleucine degradation
vsp00310
Lysine degradation
vsp00362
Benzoate degradation
vsp00380
Tryptophan metabolism
vsp00410
beta-Alanine metabolism
vsp00640
Propanoate metabolism
vsp00650
Butanoate metabolism
vsp00907
Pinene, camphor and geraniol degradation
vsp00930
Caprolactam degradation
vsp01100
Metabolic pathways
vsp01110
Biosynthesis of secondary metabolites
vsp01120
Microbial metabolism in diverse environments
vsp01200
Carbon metabolism
vsp01212
Fatty acid metabolism
Module
vsp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VS_0041
00650 Butanoate metabolism
VS_0041
09103 Lipid metabolism
00071 Fatty acid degradation
VS_0041
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VS_0041
00310 Lysine degradation
VS_0041
00380 Tryptophan metabolism
VS_0041
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VS_0041
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VS_0041
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VS_0041
00930 Caprolactam degradation
VS_0041
Enzymes [BR:
vsp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VS_0041
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VS_0041
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VS_0041
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VS_0041
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
CAV17097
UniProt:
B7VGL4
LinkDB
All DBs
Position
1:complement(38691..40862)
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AA seq
723 aa
AA seq
DB search
MIYQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSN
KDAFIVGADITEFLGLFAKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCEC
VLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
VGLLDAIVETDQLLESAINTVSLAANEKLDWQLRRKQKTSALSLSKLEAMMSFTMAKGLV
AQKAGPHYPAPITSVIAIEEAARSDRDAALDIERKHFVKLAKSEEAKALVGLFLNDQYIK
GLAKHAGKSANKATERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLELGMNEASKL
LNKRLSRGRLDGFKMAGILSSITPSLHYAGVEQSDVIVEAVVENPKVKAAVLSEVEGLVG
EDTVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGLDTAHHAQAVMAQGFPERMGKEGRDAIDALYVAEKYGQKNGSGFYTYSVDKRGR
PKKTFSEDILPILADVCQQPQDFDDQTIIQRVMIPMINEVVLCLEEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIGNFVEMAKSYQDLGAMYQVPQLLLDMAAKGESFYDGQQA
SSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagctaacaccttacaggtaaaggaattacaagatggtattgcagaactt
agcttctgtgctccggcctctgtaaacaaactcgaccttgctactttagaatcactagac
aaagcgttagatgctcttaatgctcacgctggattacgtggtttaatcttaacttcaaac
aaagacgcgttcatcgtaggcgcagacatcactgaatttcttggcctatttgctaagcca
gaagcagaacttgatgaatggttaagattcgctaattcaatcttcagcaagctcgaagac
cttcctgtcccaactctttcaatgatgcgtggccatgcccttggtggcggctgtgaatgt
gtcttagcgaccgatttccgtatcggtgacaagaccaccagcattggcctacctgaaacc
aaacttggcatcatgcctggttttggtggttgtgtgcgcctacctcgtgttatcggtgct
gacagcgcaatggaaattatcacacaaggcaaagcatgccgtgcagatgaagcgcttaaa
gttggcttgttagatgcgattgttgaaacagaccagttactagaatcggcgatcaacacc
gtttctctggctgctaatgaaaaattagactggcaattacgccgcaaacaaaaaacatca
gcattatcgctaagcaaactcgaagcgatgatgagctttaccatggcgaagggcttagtt
gctcaaaaagcagggcctcactacccagctccgattacttctgtgattgcgattgaagaa
gcagcacgcagcgatcgcgatgcagcactcgacatcgaacgtaaacacttcgttaagcta
gcaaaatctgaagaagcgaaagctctggttggcctgttcttaaatgaccaatacattaaa
ggcttagcaaaacatgctggtaaatctgcaaataaagcgactgaacgtgctgcagtactt
ggtgctggcatcatgggcggcggtattgcttaccagtcagcattgaagggcgtgccagtg
atgatgaaagacatcgcacaggcgtctcttgagcttggtatgaacgaagcttctaagctg
ttgaataaacgcttatcgcgcgggcgcctagatggattcaagatggcaggcattctgtct
tctattactccaagtctgcattatgcaggtgttgaacaatctgatgtgattgtggaagcc
gttgtagaaaaccctaaagtaaaagcagcagtgctgagtgaagttgaaggtctcgtgggt
gaagatacagttcttacatcaaacacctcaacgattccaatcaacctgttagcgaaatct
ctaaaacgcccagaaaacttctgtggcatgcacttctttaacccagtgcatcgcatgcca
ttggttgagatcatccgtggcgagcatacttcagaagagaccattaatcgcgtggttgct
tacgcagcgaagatgggcaaatcaccaatcgttgttaacgactgcccaggcttcttcgtt
aaccgtgtactttttccttactttggcggtttcagcatgttgctacgcgacggtgctgac
ttcacgaagatcgataaagtgatggaacgtaagttcggttggccaatgggcccagcttac
ttgctagacgttgtaggtttagacacagcacatcatgcacaagcagtaatggcgcaaggt
ttcccagagcgtatgggtaaagaaggccgtgatgcaattgacgcactttacgtcgctgaa
aaatacggccagaagaacggcagcggtttctacacgtacagcgtagacaaacgtggtcgc
ccgaagaaaaccttctctgaagacattcttcctatcttggctgacgtatgccaacagccg
caagactttgatgaccagacaattatccaacgtgtgatgattcctatgatcaacgaagtg
gtgctttgtttagaagaaggcattatcgcgacaccgcaagaagcggatatggcactggtt
tacggtttaggcttccctccattcagaggcggcgtattccgctacttagacagtgtgggt
attggtaacttcgttgaaatggcgaagagctaccaagacttaggtgcaatgtaccaagtt
cctcaactattgcttgatatggcagcgaagggcgaaagcttttacgacggtcaacaagcc
agttctctgtaa
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