Vibrio spartinae: Vspart_00420
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Entry
Vspart_00420 CDS
T07037
Symbol
kdsD
Name
(GenBank) Arabinose 5-phosphate isomerase KdsD
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
vsr
Vibrio spartinae
Pathway
vsr00540
Lipopolysaccharide biosynthesis
vsr01100
Metabolic pathways
vsr01250
Biosynthesis of nucleotide sugars
Module
vsr_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Vspart_00420 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsr01005
]
Vspart_00420 (kdsD)
Enzymes [BR:
vsr01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
Vspart_00420 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
vsr01005
]
Lipid A
Vspart_00420 (kdsD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
Zein
Motif
Other DBs
NCBI-ProteinID:
QMV13211
UniProt:
A0A7D8B2T2
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All DBs
Position
1:complement(456576..457547)
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AA seq
323 aa
AA seq
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MSQLNYTQSAKWVLNVEIKCLQQIEQYIDEHFCQACDMILSNTQGKVIVMGMGKSGHIGK
KMAATLASTGTPSFFVHPGEAAHGDLGMISAGDIVIAISYSGESSEILPLYPVLKRRSIR
IISMTGNPQSNMAKLADLHLQVSVPEEACPLGLAPTSSATATLVMGDALAITLLQARGFT
QEDFALSHPGGALGRKLLLKLGDIMHSGDQLPLVSPDALIRDALMEISQKGLGMTAVVDQ
QQKLLGIFTDGDLRRILDKRIDIHSAKICDVMTQNPTTASPHILAVEGLNLMQEKRINGL
MLVENGRLVGALNMHDLLKAGVM
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaactgaactacactcagtcagcaaaatgggttttgaacgtagaaatcaaatgc
ttacaacaaatagaacaatatattgacgagcatttctgccaagcctgcgacatgatcctg
agtaatacgcagggcaaagttattgtcatgggcatgggcaaatccggccatatcggtaaa
aaaatggctgcgacccttgcgagtaccggaacaccctcattctttgttcatccgggcgaa
gcagcacacggggatctcggcatgatctctgcaggcgatatcgtgattgcgatctcctac
tcaggggaatcatcagagatactgccgctttacccagtattaaaacgtcgctcaattcgc
atcatcagcatgaccggtaatccacagtccaatatggctaaacttgctgatctccattta
caagtttccgttccggaagaggcttgtccgttagggcttgctccgacatccagtgccaca
gcaacgctggtgatgggggatgcgctcgcgattacgctcttacaagcgcgcggattcact
caagaagacttcgcactctcacatccgggaggcgccttgggtcgcaaactgttactcaaa
ttgggtgacattatgcattctggtgatcaactccctctcgtcagtcctgatgctttgatt
cgtgatgccttgatggagattagtcaaaaagggttaggcatgacagccgtagtcgatcaa
caacaaaaactactcggtatttttaccgatggcgatctccgacgaattctggacaaacgt
attgatattcacagtgcaaaaatttgtgatgtgatgacccaaaatccaaccacagcatca
cctcacattcttgcagttgaagggcttaatttaatgcaggaaaaacgaatcaacggtttg
atgttggttgaaaacggccggctggtcggcgctctcaatatgcacgaccttctgaaagca
ggagtgatgtag
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