Vitreoscilla stercoraria: LVJ81_06930
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Entry
LVJ81_06930 CDS
T08153
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst00540
Lipopolysaccharide biosynthesis
vst01100
Metabolic pathways
vst01250
Biosynthesis of nucleotide sugars
Module
vst_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LVJ81_06930 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vst01005
]
LVJ81_06930 (rfaD)
Enzymes [BR:
vst01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LVJ81_06930 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vst01005
]
Core region
LVJ81_06930 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
Motif
Other DBs
NCBI-ProteinID:
UOO91406
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Position
complement(1414063..1415067)
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AA seq
334 aa
AA seq
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MTIIVTGAAGFIGSNLVLGLNKLGYTDIVAVDNLSSGDKFRNLVNADIVHYMDKLEFIDL
VRNHRLPFRHIEAVFHQGACSDTMNHDGLYMMENNYQYTLDLFDWCQDQGIPFIYASSAA
VYGKGEVFKEDRSLEKPLNVYGYSKFLFDQILRQRMAQGLNAQVAGFRYFNVYGMQEQHK
GRMASVPFHHFNQYRERGFVELFGEYNGYANGEQRRDFVSVENLVDVLLHFFEHPEKSGI
FNLGTGRSQSFNELAAATVNACRINEGKEALSLADLVKQEFIRYIPFPDSLKGKYQSFTE
ADISALREAGYGHEFYNVEQGVARYVHGLINHPV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacgattattgtgactggcgcagctggttttattggtagtaatttggtattgggcttg
aataaattgggttataccgacattgtggcggtagacaatttgagcagcggcgataaattc
cgcaatttggtcaatgccgacattgtgcattatatggacaaattggagtttattgatttg
gtgcgcaatcatcgcttgccatttcgccatattgaagcggtctttcatcaaggtgcgtgt
tcagacacgatgaaccacgatggtttgtatatgatggaaaacaattaccaatacactttg
gatttgttcgactggtgccaagaccaaggtattccgtttatttatgcctccagcgctgcc
gtttatggcaaaggcgaagtattcaaagaagaccgctctttagaaaaaccattgaatgtg
tatggttattctaaatttttattcgaccaaatcttgcgccaacgtatggcacaaggcttg
aatgcacaagtggcaggtttccgttatttcaatgtgtatggcatgcaagagcaacacaaa
ggccgcatggcttctgtaccatttcatcattttaaccaataccgtgaacgtggttttgta
gaattgtttggtgaatacaatggttatgccaatggcgaacagcgccgtgattttgtcagc
gtagaaaacttggtcgatgttttgttacacttttttgaacatcctgaaaaatcgggtatt
ttcaatttgggtacaggtcgcagccagtctttcaatgaattggcagctgctactgtcaat
gcttgtcgcatcaacgaaggcaaagaggctttgtctttggcggatttggtgaagcaagaa
ttcatccgttatattccattcccagacagcttaaaaggcaaataccaaagctttactgaa
gcggatatttcggctttgcgtgaggcaggttatggccatgaattttacaatgtggaacaa
ggtgtggcacgttatgtgcatggattgattaaccatcctgtttaa
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