Varunaivibrio sulfuroxidans: P3M64_10880
Help
Entry
P3M64_10880 CDS
T08892
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
P3M64_10880
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vsu01007
]
P3M64_10880
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsu03016
]
P3M64_10880
Enzymes [BR:
vsu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
P3M64_10880
Amino acid related enzymes [BR:
vsu01007
]
Aminoacyl-tRNA synthetase
Class I (A)
P3M64_10880
Transfer RNA biogenesis [BR:
vsu03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
P3M64_10880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
Anticodon_2
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
WES30138
LinkDB
All DBs
Position
2310159..2311772
Genome browser
AA seq
537 aa
AA seq
DB search
MSPSLPLSVTPRLRELAQNANAWPFVEARALLKHIGGKTPEKGYALFETGYGPSGLPHIG
TFGEVARTTMVRHAFMTLSDIPTRQFAFSDDMDGLRKVPDNIPNKDMVREHLGKPLTAIP
DPFGTHESFGHHNNARLCAFLDDFGFDYEFKSATAEYKSGAFDAALLGVLTHFDAVLNVV
LPTLGAERRATYSPFLPICEKTGRVLQVPVLERNVDAGTIVYQGEDGRRVETPVTGGRCK
LQWKADWAMRWVALGVDYEMSGKDLIDSVKLSSKIARVLGGRPPVNLTYELFLDDKGEKI
SKSRGNGLSMEEWLRYAPPESLSLFMYQKPKAAKRLYFDVIPRTVDDYLAHLAAFPGQDE
AKQLGNPVWHIHAGTPPEEDARLTFGILLNLAGVCHAEDKDVLWRYITRYRPDATPQNAP
LLDRLVGYAVTYYQDFVKPAAKCRPAGAEEKVALGELADALRALPEDASAEAIQAEVYEI
GKRHACFSDLKAWFRALYEILLGQSQGPRMGSFIALYGIGETLSLIENALADKHLDA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccctctctgcccctttccgtcacgccccggttgcgcgaattggcgcaaaacgcc
aacgcctggcccttcgtcgaggcccgcgccctgcttaagcatatcggcgggaaaacaccg
gaaaaaggctatgccctgttcgaaaccgggtacggcccgtcgggcctgccgcacatcggc
accttcggcgaggtggcgcgcaccaccatggtgcgccacgccttcatgaccttaagcgat
attccgacccgccagttcgccttttccgacgacatggacggcctgcgcaaggtgcccgac
aacattcccaacaaggacatggtgcgcgaacacctgggcaagccgctgacggcgatcccc
gacccgttcggcacccatgaaagtttcggccatcacaacaatgcccggctgtgcgccttt
ctcgacgacttcggcttcgactacgaattcaaaagcgccaccgcggaatacaaatccggc
gctttcgacgccgccttgctcggcgttctgacgcatttcgacgcggtgctcaacgtcgtc
ctgccgaccctgggggcggaacgacgcgccacctacagcccctttttgccgatttgcgag
aagaccggacgggtgcttcaggtgccggttttggaacgcaacgtagacgccggcaccatc
gtctatcaaggcgaagacggccgccgggtcgaaacgccggttaccggtgggcgctgcaag
ttgcagtggaaggccgattgggcgatgcgctgggtggcgcttggcgtcgattacgagatg
tcgggcaaggatttgatcgattcggttaaactgtcgagcaagatcgcccgcgttttgggc
ggtcgtccgccggtcaacctgacctatgagctgtttctcgacgacaagggcgagaaaatt
tccaaatcccggggcaacggcctgtcgatggaggaatggctacgctatgcgccgcccgaa
agcctgtccttgttcatgtaccaaaaaccgaaggccgccaagcggctgtacttcgacgtc
attccgcgcacggtggacgactatctggcgcacctcgccgcctttcccggccaggacgag
gccaagcagctgggcaatccggtttggcatattcacgccggaaccccgcccgaggaagac
gcccggctgacgttcggcatcctgctcaatctcgccggcgtctgccatgccgaggacaag
gatgtgctatggcgctacatcacgcgctaccgccccgatgcgacgcctcaaaacgcgccc
ttgttggaccgtttggtgggctacgcggtgacctattatcaggatttcgtcaaacccgcg
gcgaagtgtcgccccgccggggccgaggagaaggtggccctgggcgaactggccgacgcc
cttagggcgctgcccgaagacgccagcgccgaggccatccaggccgaggtctacgaaatc
ggcaagcgccacgcctgtttttccgacctcaaggcgtggttccgggcgctttacgagatc
ctgctcggtcaatcccaggggccgcgcatgggctcgttcatcgccctgtacggcatcggc
gagaccctgagcctgatcgaaaacgccctcgccgacaaacacctggacgcctag
DBGET
integrated database retrieval system
