Vibrio syngnathi: K08M4_00610
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Entry
K08M4_00610 CDS
T09193
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00130
Ubiquinone and other terpenoid-quinone biosynthesis
vsy01100
Metabolic pathways
vsy01110
Biosynthesis of secondary metabolites
vsy01240
Biosynthesis of cofactors
Module
vsy_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
K08M4_00610 (ubiD)
Enzymes [BR:
vsy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
K08M4_00610 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ARP36906
UniProt:
A0AA34TL18
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Position
1:63569..65410
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AA seq
613 aa
AA seq
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MSFKDLRDFIDHLESIGQLKRISHPVDPDYEMTEISDRTLRAGGPALLFENPIGYDMPVL
TNLFGTPNRVAIGMGRQEVKELREVGKLLAYLKEPEPPKGFKDALDKLPVFKQVLNMPAK
RLRKAACQQVVWQGDDVDLDKIPVMSCWADDVAPLLTWGLTVTRGPNKKRQNLGIYRQQK
IGKNKVIMRWLAHRGGALDLRDWMETNPGKPFPVSVAFGADPATILGAVTPVPDTLSEYA
FAGLLRGSKTEVVKSISNDLDVPASAEIVMEGYIDPNEFADEGPYGDHTGYYNEKEKHHV
FTVTHVTMRENPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIEDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVLVCDEDVNARDWSQVTAAMCEHMEP
SRDSLMIEHTPIDSLDFASPVVGLGSKMGLDITKKWDAELALSPDIESAPVNSEHIEGSL
AELTKTQPEIIDIHLQNDNANMVVVSIDKQAAGNGKKIMEAVWSQFDENKFVIVCDGDVN
VSDWNDIIWAVTTRMDPARDTLFLQNETGHSKMGLDATNKWEGECLREWGVPITKDPDVV
KKIDSIWEQLGIS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaagatttacgtgattttatcgaccatcttgaaagtattggtcagttgaaa
cgcatttctcacccagtcgatccagactatgaaatgaccgagattagcgaccgtactcta
cgtgctggtggcccggctcttttatttgaaaatccaataggctatgacatgcctgtttta
accaatctatttggtacacctaatcgtgtggctattggtatgggtcgtcaggaagtgaaa
gaactgcgtgaagtgggtaagttgttagcttacctaaaggaacctgagccaccaaaaggc
tttaaagacgctctcgataaactgccggtgtttaaacaagtcttaaatatgccagctaaa
cgtcttcgtaaagcggcatgccagcaagtggtgtggcagggggatgacgtcgacctagat
aaaatccccgtgatgagctgttgggccgacgatgtcgcgccattgctaacatggggatta
acggttactcgcggtcctaataagaaacgccaaaacttaggcatctatcgccagcaaaag
atcggtaagaataaagtcattatgcgttggttagcccaccgtggtggagcgcttgatctg
cgtgattggatggaaactaacccaggtaaaccattcccagtttctgtagcgtttggagca
gaccctgccaccattcttggtgcggttacgccagtgccggatactttatcggaatacgcg
tttgcaggcttactacgcggtagtaaaactgaggttgttaaatcaatcagcaatgattta
gacgttcctgcaagtgcggaaatcgtgatggaaggttacatcgacccgaatgagttcgcg
gacgaagggccttacggagatcatactggttactacaacgagaaagaaaagcaccatgtg
ttcactgttactcatgtaaccatgcgcgaaaaccctatctatcacagcacctatactggc
cgtccacctgatgagcctgcggtattgggtgttgcgttaaatgaagtgtttgttcctatt
cttcaaaagcagttcccagagattgaagatttctatctaccgcctgaaggttgttcatac
cgaatggcagtagtaaccatgaagaagcaatacccaggtcacgctaagcgagtgatgatg
ggtgtatggtctttcttacgccaattcatgtacaccaagtttgtattggtgtgcgatgaa
gatgtgaatgcacgagactggtctcaagtgaccgctgctatgtgtgaacatatggaaccg
tcacgcgatagcttgatgatagagcacacgccaatcgattcattggattttgcatcaccc
gtggttgggttaggctctaagatgggcttagacatcactaagaagtgggatgccgagtta
gcactatcgccagatatcgaatcagcacctgtaaatagtgaacatatagagggcagctta
gctgagttaaccaagactcaacctgaaattattgatattcacctgcaaaacgataatgcc
aacatggttgtggtgtctattgataagcaagctgcaggtaatggtaagaaaatcatggaa
gcggtttggtctcaatttgatgagaacaagtttgttatcgtgtgtgacggcgatgtcaac
gtgagtgattggaatgacattatttgggcggtgaccacaagaatggatccggccagagat
acgttgttcctacagaatgaaacaggacactcaaaaatgggtctagatgcgaccaataag
tgggaaggcgaatgcctgcgtgagtggggtgttccaatcacaaaagatcctgatgtcgtt
aaaaagattgatagcatctgggaacagctaggaatttcatga
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