Vibrio syngnathi: K08M4_01260
Help
Entry
K08M4_01260 CDS
T09193
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsy03016
]
K08M4_01260 (trmA)
Enzymes [BR:
vsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
K08M4_01260 (trmA)
Transfer RNA biogenesis [BR:
vsy03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
K08M4_01260 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_11
Methyltransf_31
Cons_hypoth95
Met_10
Methyltransf_15
Methyltransf_12
PrmA
DREV
Motif
Other DBs
NCBI-ProteinID:
ARP36962
UniProt:
A0AA34TLI6
LinkDB
All DBs
Position
1:complement(131736..132845)
Genome browser
AA seq
369 aa
AA seq
DB search
MANLEVNPQRYQEQLVEKTERLTEMFSEYNVPELEVYESPEQHYRMRAEFRVWHEGDDMY
YVMFNQETKEKYRVDQFPAASRLINDLMPLLTDAMKDNHSLRHKLFQVDFLSTLSGEILV
SLLYHRQLDEQWIQDAKALKQQLNDEGFNLNLIGRARKMKIVLDRDYVIEKLDVNGDSYI
YQQVENSFTQPNGKVAEKMLEWAVDCTQDSKGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVESAQYNIAANKIENVQIIRMSAEDFTVAMEGKREFRRLQQANIDLKSYNCNTIFV
DPPRSGMDVDTCKMVQGYERIMYISCNPETLKENLDILSETHDITRFALFDQFPYTHHME
AGVFLERKA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttagaagtaaacccgcaacgctaccaagagcaactcgtagaaaagactgaa
cgtcttactgaaatgttctcagaatataatgtgcctgagctggaagtgtatgaatctcca
gagcaacactaccgcatgcgtgctgaattccgtgtgtggcatgaaggtgacgatatgtat
tacgtcatgttcaatcaagaaactaaagaaaaataccgcgtagaccagttcccagcggct
agccgcctgatcaacgatctaatgcctctcttaacggatgcaatgaaagacaaccattct
ctgcgccataagctcttccaagtcgatttcctttcgactttaagtggtgaaattttggta
tcactgctttaccaccgtcaattggatgaacagtggattcaagatgctaaagcacttaag
cagcaattaaacgatgaaggttttaatctaaacctgattggccgtgctcgtaagatgaaa
atcgtactggatcgcgactacgtcattgaaaaactagatgtgaatggtgatagctacatc
taccagcaagtagaaaacagctttactcaaccaaacggcaaagtagcagagaaaatgttg
gaatgggctgtcgactgcactcaagacagcaaaggcgacttgcttgagctttactgtggt
aacggtaacttctcactagcactggcacagaacttcgaacgtgtactggcaacagaacta
gcgaagccgtcagtagagtccgcgcaatacaacatcgcggcgaacaagattgaaaatgtt
cagatcatccgcatgtctgcagaagactttaccgtagcaatggaaggcaagcgtgaattc
cgtcgcctacaacaagcaaacatcgatctgaagagctacaactgcaacactatttttgtt
gatccaccacgttcaggtatggatgtggatacttgtaagatggttcaaggttacgagcgc
atcatgtacatctcttgtaaccctgagacattgaaagagaacctagatattctaagcgaa
acgcacgatatcactcgttttgctctatttgaccagttcccttacacgcaccacatggag
gctggtgtattcctagagcgtaaagcgtaa
DBGET
integrated database retrieval system
