Vibrio syngnathi: K08M4_03600
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Entry
K08M4_03600 CDS
T09193
Symbol
kdsD_1
Name
(GenBank) Arabinose 5-phosphate isomerase KdsD
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy00540
Lipopolysaccharide biosynthesis
vsy01100
Metabolic pathways
vsy01250
Biosynthesis of nucleotide sugars
Module
vsy_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K08M4_03600 (kdsD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsy01005
]
K08M4_03600 (kdsD_1)
Enzymes [BR:
vsy01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
K08M4_03600 (kdsD_1)
Lipopolysaccharide biosynthesis proteins [BR:
vsy01005
]
Lipid A
K08M4_03600 (kdsD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
ARP37181
UniProt:
A0AA34TLK9
LinkDB
All DBs
Position
1:complement(375242..376213)
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AA seq
323 aa
AA seq
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MSQPFDYCSVAKQVLETEVAGLTQLDQYFNDDFSKACDLILNNKGKVVVMGMGKSGHIGN
KIAATLASTGTSAFFVHPGEAAHGDLGMIEPGDIVIAISNSGESGEILSLFPVLKRLNIK
IISMTGKPASNMATLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFT
AQDFALSHPGGALGRQLLLKLDDIMHTGDALPTVAPDALVRDALLEISQKGLGMTAIVGE
DGQMKGIFTDGDLRRILDKRIDIHNTQIGDVMTLNPTVAEPNMLAVEGLNLMQAKSINGL
MLCDNGKLVGALNMHDLLKAGVM
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccatttgattattgcagcgttgcaaaacaagttttggaaactgaagttgca
ggtctcacgcaattagaccaatattttaatgatgattttagcaaagcttgcgacctaatc
ctgaacaacaaaggcaaagtcgtagtaatgggcatgggtaaatcaggccacattggtaac
aaaatagcagctacactggcaagtactggtacatcggctttctttgtacacccaggtgaa
gcggcgcatggtgatttaggcatgatcgaacctggcgatattgtgatagcaatatccaac
tcaggtgaatcaggagaaatcctcagcctattcccagtattaaagcgtttaaacattaag
attatcagcatgaccggtaagccagcatcaaacatggcgactttatctgatattcattta
cagatttcagtacccgaagaagcgtgtccccttggtttagcaccaacaaccagtactacc
gctaccttggttatgggtgatgcattagccgttgcacttttacaggcaagaggttttacc
gctcaagattttgcactgtctcatcctggtggtgctttaggccgtcaactgctgttgaaa
ctagacgacatcatgcacaccggcgatgcactcccaactgttgctccggatgcactagtt
cgagatgccctgttagagatatctcaaaaaggcttgggcatgacggcaatcgtcggtgaa
gatggccaaatgaagggcatttttaccgatggtgatttacgccgtatcttagataaacgt
attgatattcataacacgcagatcggcgacgtgatgacacttaacccgacggtagcagaa
cccaatatgctcgcagttgagggcttaaatttgatgcaggctaagagcatcaatggcctg
atgttgtgtgataatggcaaattagtaggcgctttaaatatgcatgacttactgaaagca
ggagtaatgtaa
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