Vibrio syngnathi: K08M4_37200
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Entry
K08M4_37200 CDS
T09193
Name
(GenBank) EAL domain-containing protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
K08M4_37200
Enzymes [BR:
vsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
K08M4_37200
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
ARP40381
UniProt:
A0AA34XQE1
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All DBs
Position
2:827824..829731
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AA seq
635 aa
AA seq
DB search
MKKIKTIDLDIPDDMASSWQNIVNLLAQITQVPAALIMRVHTNYIEVFSTSHSRDNPYNK
GDSETLGNGLYCETVMESQQQLLVPNALADVDWKNNPDTKLGLISYCGIPLFWPNGELFG
TICILDSKENHYTPTYIKLLESFRTSIESQLKTLFQHAKLTQMNRDLKSRVATRTKDLAS
LNYSLNQEIDKRRAAEQEINFQKNHDLGTGFLNRSAFESRLDQKLTSQQRFTGGSLAVIH
IGFTNGRRIQARYGYNALDQVLVEYRQRIDSISDVEVLTARPTSVDLVLAFSVKDLHQRI
EELCQTLVKVGHSEFDIGSDKVHLHAFIGIAITDHDDDADSIIQKSSEAMLACKDSGQKF
AYYSQSHAEEQSHINKIEGYLLQAVRNDDLMLYFQPKVCPLTHRWVGAEALLRWRHPVLG
DISNETLIHMAEQNGLIFEVGNFVLRNAIEQAKEWSEYVEDFKIAVNVSAIQLKNVDFAE
QIIHLLETYHLEPHFLELEVTESCLIADEVVAKNTLESLHDTGVTLSLDDFGTGYASFSY
LKKFPFDTIKIDKSFIDQMLNSQEDSEIVRSIVQIAKKLDLKVTIEGIESEVQEQFIINE
GCDVGQGYLYGKPMPSQEFEHSLINQNYLGTTRYA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagataaaaacgatagacttagatatccctgacgatatggcctccagctggcag
aatattgtcaacctcttggctcaaatcactcaagtgcctgctgcacttatcatgcgtgtt
cataccaactacattgaagttttctctaccagccacagtcgggataacccttataacaaa
ggcgattctgaaacattaggcaatgggctttactgcgaaacggtgatggagtctcagcag
cagcttttagtacccaatgcgcttgccgatgttgattggaaaaacaaccccgacacaaag
cttggcttaatctcttattgtggcattccgctattttggcctaacggcgaattgttcggc
accatttgtatcttggactcgaaagaaaatcactacacacctacctatattaagctatta
gaaagctttcgcacctcgatagaatctcaattaaaaaccttgtttcaacacgctaagctc
actcaaatgaatcgtgacttaaaaagccgcgttgcgactcgaactaaagatctcgcgagt
cttaattattcattaaaccaagagattgataagcgaagagcggcagaacaagagatcaat
ttccaaaaaaatcacgacctcggcacgggctttttgaaccgaagtgcttttgagtcgcgc
ttagatcagaaattgacgtcacaacaaaggtttactggtggctcactcgcggtaatccat
attggatttactaatggcaggcgcattcaagctcgatatggctacaacgcgttagaccaa
gtactggttgaataccgacaacgcatcgacagtatctctgatgtcgaggtactaactgcg
cgccctacttcggttgaccttgtgttggcgttcagcgttaaagatttgcaccagcgtatc
gaagaactatgccagacattagtaaaagtgggtcattcagaatttgacatcggtagtgac
aaagtgcatctgcatgcctttatagggattgcgattactgatcacgacgatgatgctgac
agcataatccaaaaatcttcagaagcgatgctggcatgtaaagattccggacagaagttc
gcttactattctcagtctcatgctgaagaacaaagccatattaataagattgaaggttat
ttactccaagcggttcgcaatgatgaccttatgctctattttcagcctaaagtatgcccg
ttgactcatcgctgggttggtgcagaagctctactgcgttggcgacaccccgttctggga
gacatctctaacgaaaccttaatacacatggctgagcaaaatgggttgattttcgaagtg
ggaaattttgttctgcgcaacgcgattgagcaagctaaagagtggtccgagtatgttgaa
gatttcaaaattgccgtaaatgtgtcagcgattcaattaaagaatgttgatttcgcagag
caaattattcacctgctggaaacctatcacctagaacctcatttcttagaacttgaagtc
acggaaagttgcctcatagcagatgaagtcgtcgcaaagaatacattggaatcgttacac
gacactggtgttacattgtcactggatgactttggtacgggctatgcctcattcagttac
cttaagaaattcccattcgatacgattaaaattgataagagcttcatcgaccaaatgctc
aactcgcaggaagactcggagatcgttcggtcgatagtccaaattgcgaaaaagctcgac
ttaaaagtcacgattgaaggcatagaatcggaagttcaggagcaatttatcatcaatgaa
ggctgtgatgtgggtcaaggttacctttacggcaagcctatgccgagccaagaattcgaa
cacagcttaatcaatcaaaactatttggggacaactcgttacgcttaa
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