Vibrio tapetis subsp. tapetis: A3245
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Entry
A3245 CDS
T05424
Symbol
fadB
Name
(GenBank) fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta00071
Fatty acid degradation
vta00280
Valine, leucine and isoleucine degradation
vta00310
Lysine degradation
vta00362
Benzoate degradation
vta00380
Tryptophan metabolism
vta00410
beta-Alanine metabolism
vta00640
Propanoate metabolism
vta00650
Butanoate metabolism
vta00907
Pinene, camphor and geraniol degradation
vta00930
Caprolactam degradation
vta01100
Metabolic pathways
vta01110
Biosynthesis of secondary metabolites
vta01120
Microbial metabolism in diverse environments
vta01200
Carbon metabolism
vta01212
Fatty acid metabolism
Module
vta_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A3245 (fadB)
00650 Butanoate metabolism
A3245 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A3245 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A3245 (fadB)
00310 Lysine degradation
A3245 (fadB)
00380 Tryptophan metabolism
A3245 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A3245 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A3245 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A3245 (fadB)
00930 Caprolactam degradation
A3245 (fadB)
Enzymes [BR:
vta01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A3245 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A3245 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A3245 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A3245 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
SON51206
UniProt:
A0A2N8ZH51
LinkDB
All DBs
Position
A:3402548..3404719
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQSNTLQVKELQDGIAELSFCSPESVNKLDVATLESLDKALDALKQATSVSGLILTSN
KNAFIVGADITEFLGLFAKPEEELDQWLRYANDVFNKLEDLPFPTLSVLRGHTLGGGCEC
VLATDFRIGDKTTSIGLPETKLGIMPGFGGSVRLPRVIGADSAMEIITQGKACRADEALK
LGLLDALVDSDQLFESAIKTITQAKNEQIDWQSRRQQKTSPLTLSKLEAMMSFTMAKGLV
AQKAGPHYPAPITSVKAIEEAARLSRDEALDIERKHFVTLAKTEVAQALVGLFLSDQYIK
GLAKKAEKSAQTDTKRAAVLGAGIMGGGIAYQSALKGVPVIMKDIAQASLDLGMNEASKL
LNKRLSRGRLDGFKMAGILSSITPSLHYAGIEQADIVVEAVVENPKIKAAVLAEVEDKVE
DNAVVTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSDLLRDGADFTQVDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAQGFPERMGKNGRDVIDALFEADKYGQKNGSGFYSYSVDKKGR
PKKTFDDSILPTLESVTNDKQSFDEQTIIQRMMIPMINEVALCLEEGIIASPQEADMALV
YGLAFPPFRGGVFRYLDTIGVANYVAMAANYKELGPLYQVPQLLLDMAQDNGSFYNAQVE
QSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaatctaacaccctacaagtaaaggaattacaagacggaatcgccgagtta
agcttctgctctccagaatcagttaacaaactcgacgttgcaactcttgaatcgctggat
aaagcccttgatgccctgaagcaagccacttcagtatcaggtttaatcctaacttcaaac
aaaaatgcatttattgtcggcgctgatattaccgaattcctcggtctatttgcgaagcca
gaagaagaattagaccaatggttgcgctatgccaacgacgtgtttaataagttggaagac
cttccattcccaacgctatctgttctgcgtggccacactttaggtggtggctgtgaatgc
gtactcgcaaccgatttccgtattggtgacaagaccaccagcattggcttaccagaaacc
aaacttggcatcatgccgggctttggtggcagtgtgcgtttgcctcgcgtgattggtgct
gatagtgctatggaaatcattactcaaggtaaagcttgtcgagcggatgaagccttaaag
ctgggtctattagatgccctagttgatagtgaccaactgtttgagtctgcgatcaagacc
atcacacaagctaaaaacgaacaaattgattggcagtctcgacgtcagcaaaaaacgtcg
ccactgacgctgagcaaactcgaagctatgatgagttttaccatggcaaaaggccttgtt
gctcaaaaggctggccctcattacccagcacccattacgtcagtaaaagccattgaagaa
gccgctcgcttaagccgagacgaggctttggatattgaacgcaagcactttgttactctg
gcaaaaacagaggtagcccaagccttggttggtttgttcttaagcgaccaatacatcaaa
ggtttagcgaaaaaagctgaaaaatcagctcaaactgacaccaagagagcggctgtactt
ggcgcaggtatcatgggcgggggtatcgcttatcaatctgcattgaaaggtgtccctgtc
atcatgaaagacatcgctcaggcatcccttgatttaggtatgaatgaagcgtcaaaatta
cttaacaaacgcctgtctcgtggtcgattagatggcttcaagatggctggcattctttct
tccatcacgcctagtttgcactatgcaggtatcgagcaagccgatatcgttgttgaagct
gttgtagaaaatccaaaaatcaaagcggccgtattggctgaagttgaagataaagtagaa
gacaacgcggtcgttacttctaatacttcaactattccaatcaacttactggctaagtca
ctaaaacgcccagaaaacttctgtggcatgcacttcttcaacccagtacatcgtatgcct
ttggtcgaaattatccgtggtgagaagacctctgatgaaaccatcaatcgtgttgttgct
tacgcagctaaaatgggcaaatcacccattgtcgttaatgactgccctggattctttgta
aaccgagtacttttcccttacttcggtggtttcagtgacctgcttcgtgatggcgctgac
tttactcaagtagacaaaatcatggaaagaaagtttggctggccaatgggcccagcttac
ttgcttgatgtggttggaatagataccgctcaccatgctcaagcggtgatggcgcaaggc
ttccctgagcgcatgggtaaaaatggccgtgacgtgattgatgctctatttgaagcagat
aaatacggtcagaaaaacggttctggattctacagctacagcgtagataaaaaaggccga
ccaaagaaaaccttcgatgacagcatattaccgacactcgagtcggtaacgaatgacaag
caaagcttcgacgaacaaaccattattcagcgaatgatgattccaatgatcaatgaagtg
gctctgtgtttagaagaaggcattattgcttctccacaagaagccgacatggcattggtg
tacggattagccttccctccattcagaggtggtgtgttccgttacctagataccataggt
gttgctaactatgttgcaatggccgccaactacaaagaactcggcccgttgtaccaagtg
cctcaattactacttgatatggcgcaagacaatggcagcttctataacgcccaagtcgag
caatcactgtaa
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