Vibrio tarriae: CEQ48_04505
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Entry
CEQ48_04505 CDS
T08683
Name
(GenBank) sensor domain-containing phosphodiesterase
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vti
Vibrio tarriae
Pathway
vti05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CEQ48_04505
Enzymes [BR:
vti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CEQ48_04505
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
GIY_YIG_2
GAF_3
Macoilin
Motif
Other DBs
NCBI-ProteinID:
ASK54048
LinkDB
All DBs
Position
2:complement(885746..887629)
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AA seq
627 aa
AA seq
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MAPILSHSIPIPSSMQASWQEMLNLLAEVLKVSATLIMRLRHHDLDVFCTSVSSDNPYQV
GMTERLGTGLYCETVVNTRQLLLVSNADLDPLWKDNPDLELGMRAYCGVPLQWPNGELFG
SLCVTDRQARQFLSTDQQLIKTFAESIEAQLKTLYQRETLLQMNQDLHFKVRHKMQSIAS
LNQSLHQEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEHQLAMQLTQLTEHEELAVIHIG
FANARQLQARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQ
LCHRLIHAGQAQFVTDGLPVHLNPYIGVALSHETRDPQQLLRHAVSSMLACKDSGYKVFF
HSPALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPVLGEF
SNETLIHMAEQNGLIFEVGDFVLHQALKAASDWLVMCPTFHIAINVSSVQLKNSGFVEQI
RDLLALYHFPAHQLELEITESGLIVDEPTASEILNRLHTLGVTLSLDDFGTGYASFQYLK
KFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILEHGC
DVGQGFLYGKPMPREAFTQKLESRAQI
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgatcctttcgcactcgatcccgatcccttccagcatgcaagcaagttggcag
gagatgctcaacctgctggccgaagtgctgaaagtttcagccaccctgatcatgcgttta
cgtcatcacgaccttgatgtgttttgcacgagtgtgagtagtgataacccatatcaagtc
ggcatgaccgaacggttaggcacaggcttgtattgtgaaactgtggttaatactcgccag
ttattgctggtcagtaacgccgacctcgacccattgtggaaggataacccagatctagaa
ttgggcatgcgcgcttactgtggcgtgccattgcaatggccaaacggtgagctttttgga
tctttgtgtgtcaccgatcgtcaagctcgccagtttcttagtaccgatcagcaattgata
aaaacctttgctgaatcgattgaagctcagcttaaaaccctttaccaacgcgaaacgctg
ttgcaaatgaaccaagatttgcacttcaaagttcgtcataaaatgcaaagtatcgcctcg
ctgaaccaatctctccatcaggagatcgataagcgccgcgccgcagaacagcagattgag
taccagcgcagtcacgaccttgggactggctttcttaatcgcacggcattggagcatcag
ctcgcgatgcaactgactcaattaactgagcacgaagagctcgccgtgattcatatcggt
tttgccaatgcccgccaattacaagcacgactgggttaccacctttgggatgatgtgtta
aagcagttacgtgaacggcttggcccggtgacggaaggggaattactgaccgctcgccct
aactcgactaatttgacgctgatcttaaaagcccatccgctcgacacccaattaaatcag
ctttgccatcgtttaattcacgctgggcaagctcaatttgtgacggacgggcttcccgtt
cacctcaacccttatattggcgtagcccttagccacgaaacgcgcgatccgcagcagcta
ctgcgccatgccgtcagcagcatgctggcgtgtaaggactcgggatacaaagtgtttttt
cactcccccgcattagccgataaccatgcgcggcaaaatcaattggaaaactatttactg
caagcggtgcgcaacaatgacctgctgctctattttcaacccaaagtcagcatgaaaacc
cagcgctgggtcggtgctgaggcattattgcgttggaagcacccagtgctgggtgagttt
tccaatgaaaccttaattcatatggcagaacaaaacggcctgatcttcgaagtgggagat
tttgttttgcaccaagctctgaaagccgccagtgactggttagtgatgtgtccaactttt
catatcgccatcaatgtctcttccgtgcagcttaagaacagtgggtttgttgagcaaatt
cgcgatctgctggctctataccatttccctgcacatcagttggaactggaaatcaccgaa
agtggcttgattgtcgatgaaccgaccgcgagtgagattctcaatcgactacacacactg
ggcgtgactttgtcactcgatgattttggtacgggttacgcttcgtttcagtatctaaaa
aaattcccgtttgatggcatcaagattgataaaagttttatggagcagatcgaacacagt
gaaagcgatcaggaaattgtgcgctctatgctgcatgtggcgaaaaaactgaacttaaac
gtggtggtggaaggtattgagtcgacacaacaagaacagttcattcttgaacatggctgc
gatgtcggccaaggctttttatatggtaagcccatgcccagagaggcctttacgcaaaag
ctcgaaagccgagctcagatataa
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