KEGG   Vigna umbellata (ricebean): 124825137
Entry
124825137         CDS       T09662                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03020  RNA polymerase
vum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124825137
  09124 Replication and repair
   03420 Nucleotide excision repair
    124825137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vum03021]
    124825137
   03400 DNA repair and recombination proteins [BR:vum03400]
    124825137
Transcription machinery [BR:vum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124825137
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124825137
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C MDD_C Thioredoxin_3 DUF6744 CpXC zinc_ribbon_4
Other DBs
NCBI-GeneID: 124825137
NCBI-ProteinID: XP_047153633
LinkDB
Position
Unknown
AA seq 114 aa
MSTLRFCGGCNNVLYPTEDKENKVLLHTCRYCNHEERADTNVVYRNKLHHSVQRHTRELE
NVAADPTLPRTKSVRCSQCNHGEAVFFKATAKGEEGSALNFVCCNPTCGNRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtacactgagattttgcggtggatgcaacaatgttctataccctacagaggacaag
gagaacaaggttcttctccacacttgccgctactgcaatcatgaggagcgtgcagatact
aacgttgtctatagaaataagttacatcactctgttcaaaggcacactcgagagctggaa
aatgtagctgcagatccaacacttcctcgcaccaagtctgttcgctgctctcaatgcaac
catggagaagctgtctttttcaaggcaacagccaaaggggaagaaggctcggcactcaat
tttgtttgctgcaacccaacttgtggcaaccgttggagagagtag

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