Vigna umbellata (ricebean): 124828962
Help
Entry
124828962 CDS
T09662
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124828962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124828962
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124828962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
124828962
NCBI-ProteinID:
XP_047158317
LinkDB
All DBs
Position
Unknown
AA seq
2082 aa
AA seq
DB search
MPLFLSDEEFSRCSGDGAAVAAKADAFIRGLLHELDTVRAKADAADINAEQNCSLIEQKY
LSLTAEFSKLEAHVADLQSSLSQRLRELAEVQSENHQIQLQSVEKDREIERLRMEVGELH
KSKRQLIELNEQKDLELSEKNATMKSYLDKIVHLSENAAHKEARLSEVEAELARCRAACS
RLEHEKEIIEKQNSWLNEELNGKVNSVFELRRKNADLEADTSSKLTDMERQLNECSQSLQ
WNKNRIRELEMKLKSVQEELISAKDAAATNEEQLSAELSTVNKLNELYKESSKELSKKAT
DLEGVIKALESDLKQVEDHYKVELEKELSARKQVEKEVTDLKEKLEKFEAESEARKKTNE
LNNLPLSSFTTESWMESVEADSMVEENSLLVPKLPVGVSGTALAASLLRDGWSLAKMYSK
YQEAVDALRHEQLGRKESEAVLQRVLFELEEKAEAIIDEREEHEKMADAYSLMSQKLQNS
LNENSNYEKTIQELKADLKRRERDYNLVLKETDDLRKQVTVLLKECRDIQLRCGSMGYDN
VDYSSNTASRTITETEAEHVISEHLLTFKDINGLVEQNVQLRSLVRSLSGQIENQEVEFK
EKLEMELKKHTEVAASKVAAVLQRAEEQGQMIEALHASVAMYKRLYEEEHNLHLSHNHSS
EARAAFAEVGRNNLKTSIESSQEASKKSLEKAAERMRCLEDDLAKSRSEIILLRSERDKM
ALEADFSRERLDSFMKEFGHQKAEAKAILERNVEFSQLVVDYQRKLRESSESLIAAEELS
RKLTMEMSVLKQEKEIISNAEKRASDEVRSLSERVQRLQASLGTIQSTEEVREEARAAER
VKQEEYIRKLEKEWAEAKQELNEERENVRKFTLDRDQTIKSSLRQVEDMNKELANALRAV
ASAESRAAVAEAKLSSLQRKLGSSNDKLIEMGGESGPSTLSSDEVVTELQKAKEEIEKFK
EEAHANKVHMLQYKSIAEVNEDALKQIEMAHEKFKTEAEDAKKVLESELNSLREKMLEIE
NESSLKYEEVASETVGKEEALTSAMAEITNLKEEILTKSSQISALEIQLSGLKENLDREY
QKWRAAQTNYERQVVLQSETIQELTKTSEALSLLQEEASELRKLNNTQKVENNELKARWE
EEKAQLEKSRNDAERKYNEINEQNKILHSQLEAFHIRWAEKERNAAGISSGSSSADAFGD
AGLQNVINYLRRSKEIAETEVSLLKQEKLRLQSQLESALKAAESAHASLESEHAKLKSFL
FTEEEFKSLQLQVREMNLLRESNMQLREENKHNFEECQKLRELAQKARAETDNLENALRE
REIELEGCKKEIETLKLEKDNLNNKVLELLEKSKNVDVEDYDRVKKLAREIQDKLRDRDA
QIEEMSRSLSEKQDSVSRLEKDLASCRLQLAEREKRIHDILHNEANLKLDLEKHRKLLAQ
YKKRIDVLLREKEEAGKENQQLSRQLDEIKQGKRSAPDTTGEQAMKEEKDTRIQILEKHL
ERLRDELKKEKEESRLERGRRLKSEKAIKDSYNNVEQEKTKFVNEIEKHKESLKKLSDEV
EKLKIVIGNIPEGSNVVQLLSGPNVDDLAASYISSVESFEKEAHSIFRELGGRGNLGDAA
TNTDGSTAATGSLVQVQSQSTASLAAPGASSLPPKATGESEKRLALPLSKASVETRRTGR
KLVRPRLVRPDEPQGDTEMSDAEGPLGKTGPSSDTETSNFAQSSQPLARKRLAPTSSSEL
REESVASGEKSSDVVAPVLKKSKGSESPEESTEEQPAAALEFTGSQQATEELFDSSELPQ
GQNEEGEVQNEDGEIAVGNDEESKDPQHLDGTSHEELPGDRTGILDENPDQPDEMRRDHT
DADNQQSILAPSGEREEGELLPDAGDLEGGSDLSNIVENQESREGQSESAATPERSPARG
DDDALEAGEINSPELSSDDKNDEPDLVEEAADGSDKLIDVNEPISVESDQVADPTPVVSD
ASTLTSSVIESSSSKVNIPVPRQGTPTAPSETEETTKQASPIGSTSTTINLSERARERAQ
MRQAGLVSTPNVTRGRGRAAPRGRGRGRTVVRRPPPSSGGEP
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttcctctccgacgaggagttctcgcggtgctccggtgacggagccgccgtg
gcagcgaaggccgacgcgttcatccgcggcctcctccacgagctcgacaccgtccgcgcc
aaggccgacgccgctgatatcaacgccgagcagaactgttccctcatcgagcagaaatac
ctctccctcaccgccgagttttccaagttggaggcccacgtcgccgacctccaatcttcc
ctcagtcagcgcctccgcgaactcgccgaggtgcaatcggagaaccaccaaattcagttg
caatcggttgagaaagatagggagatagagcggttgaggatggaggtgggggaattacac
aagtcaaagaggcagttgattgagttgaacgagcagaaggatttggagcttagtgagaag
aatgcaactatgaagagctatcttgataagattgtccatttaagtgaaaatgctgctcat
aaggaggctcgattgagtgaagttgaggcagaattagcgcggtgccgggctgcttgcagt
cgccttgaacatgagaaggagattattgagaagcagaattcttggcttaatgaggagttg
aatggtaaagttaatagtgtttttgagctacgcagaaagaacgcagatttggaagctgat
acatcttccaagcttacagatatggagagacaattgaacgaatgctctcaatctctacaa
tggaataagaatagaataagggagcttgaaatgaagcttaaatctgtgcaggaggaatta
atttcagctaaagatgctgcagcaaccaatgaagaacaattatctgctgaactctctact
gttaataagcttaatgagttgtataaagagagttccaaggaattgtcaaaaaaagcaact
gacctagaaggtgtgataaaagcgttggagtccgacttaaagcaagttgaggatcattat
aaagtggaacttgagaaggaattatctgccagaaaacaggttgaaaaggaggtcactgat
ttaaaagagaagcttgagaaatttgaagctgaaagtgaggcaaggaagaagaccaatgag
ctgaataatcttcctcttagcagtttcactactgaatcgtggatggaatcagttgaagct
gatagcatggtggaggaaaatagcttgctagtcccaaaacttcctgttggagtttctgga
actgcattggcggcttcacttcttcgagatgggtggagtttggccaaaatgtattcaaaa
taccaagaggctgttgatgcattgaggcatgaacaattgggaaggaaggagtcagaggca
gtactgcaacgggttctatttgagttagaggagaaagcagaagcaattatagatgaaaga
gaggagcatgaaaagatggccgatgcatactctttgatgagccaaaagttgcaaaactcc
ctgaacgaaaattccaactatgagaaaaccatccaggaactgaaggctgatctgaaaagg
cgtgaacgtgattataatcttgtcctgaaggaaactgacgaccttcgaaagcaagtgaca
gtacttttaaaggaatgtcgagacattcaacttcgttgtggctcaatggggtatgataat
gttgattattcttcaaacactgcttcaaggacaattacagagactgaagctgagcatgtc
atatcagagcacctgttgacctttaaggacattaatggactagttgagcagaatgttcaa
cttagaagccttgtacgtagtctttctggccagattgaaaatcaggaggtggaattcaag
gagaagcttgaaatggagctcaaaaagcatactgaagtagctgcttctaaagttgcagct
gttctgcagagagcagaagagcaagggcaaatgattgaggcacttcatgcatctgttgcc
atgtacaaaaggttgtatgaggaggagcataatcttcatttatctcataaccattcttca
gaagcacgtgcagcttttgccgaagttggaagaaacaaccttaagacttcaattgaaagt
tcacaggaggcttctaagaagtccctggaaaaagctgctgagcgtatgagatgccttgag
gatgatttagcaaagtctaggagtgagattattttattacgatctgaacgtgacaagatg
gcacttgaagcagatttttctagggaaagacttgatagctttatgaaagaatttgggcat
cagaaagctgaagcaaaagccattttagaaagaaatgtagagttttctcagctggttgtt
gactaccaacgaaaactgcgtgaaagctctgagtctttgattgctgctgaggagctttct
cggaaacttactatggagatgtcagttttaaaacaagaaaaagaaatcatatcaaatgct
gagaaaagagcgtctgatgaggttcgcagtttgtctgaaagagtgcagcgtttgcaggct
agtttgggcaccatacaaagtactgaggaagttcgagaggaagcaagagctgcagagagg
gttaagcaagaagaatatataaggaaattggagaaggagtgggctgaagccaagcaagag
ctaaatgaagagcgggaaaatgtgcggaaattcacactagacagggaccagaccataaaa
agttctctgagacaggttgaggatatgaacaaagagttagctaatgctttacgtgcagtt
gcatctgctgaatcaagggctgctgttgctgaggcaaaactctctagtctacaaagaaag
ttgggttcctctaatgacaagcttatcgaaatgggcggagagagtggaccttccactttg
tcaagtgatgaggttgttactgaattgcaaaaggcaaaggaggagatagaaaagtttaaa
gaggaagcacatgccaacaaagttcacatgcttcagtataagagcattgctgaggtcaat
gaagatgcactgaaacagatagaaatggcacatgagaagtttaaaacagaggctgaagat
gccaagaaggttcttgaatctgaacttaattcacttagagagaagatgttagagattgaa
aatgaatctagtttgaaatatgaagaagttgcttctgaaactgtgggaaaggaagaggct
cttacatctgctatggctgaaatcacaaatcttaaagaggaaattttaacaaaatcctct
caaatttcagcattggaaattcagctatcaggtttaaaggaaaacctggacagggagtat
cagaaatggcgggcagctcaaactaattatgaaagacaggttgttctccagtctgaaacg
attcaggagttaacaaaaacatctgaagcactatccttgctgcaggaggaggcatctgag
ttacggaaactaaacaatactcagaaagttgaaaataatgaactgaaggctaggtgggaa
gaggagaaggcacaattagagaagtctaggaatgatgctgaaaggaaatacaatgaaatc
aatgaacagaataaaatattacacagccaacttgaggcttttcatattcgatgggctgag
aaggagcgtaatgctgctggtatttcatccggaagtagtagtgcagatgcctttggtgat
gctggacttcaaaacgtgattaattatctcagacgatcaaaagaaatagcagaaacagaa
gtttctttgttaaaacaagagaagctgcgtttacagtcacagcttgagagtgctttgaag
gcagcagaatctgcacacgcatcactagaatctgagcatgcaaaattaaaatcatttttg
tttactgaagaagagttcaaatcgctgcaactccaggtcagagaaatgaacttacttcgt
gagagtaacatgcagctcagggaagaaaataaacacaatttcgaggagtgccagaaactg
cgtgaactagcacaaaaggctagagctgagacagataaccttgagaatgccctgagggaa
agagaaattgagcttgaaggctgtaagaaggaaattgaaacactaaaactggaaaaagat
aatctcaataacaaggttttggagttgcttgaaaagagtaaaaacgttgatgttgaggat
tatgatcgagtgaagaaacttgctagagaaattcaggataaactcagagatagggatgct
cagattgaggaaatgagtagaagtctatcagagaagcaggattctgtttcacgtctagaa
aaagatcttgcaagttgccgattgcagcttgcggagagagagaagagaattcatgacatt
ctgcataatgaggctaacctaaaacttgatttggagaagcataggaaactgctggctcag
tataagaagaggattgatgttttgttaagggaaaaggaagaggcaggtaaagagaaccag
caactatctaggcaattagatgagattaaacaagggaaaaggtcagcacctgatacaact
ggtgaacaagcgatgaaggaagaaaaggacacaagaatacagattctggagaaacatcta
gagagacttagagatgaattaaagaaggagaaggaagaaagtcgcctagagagagggaga
cgactgaagagtgaaaaggccataaaggactcttacaacaatgttgagcaggagaaaaca
aaatttgttaatgaaattgagaagcacaaggagtctctgaaaaagttatctgacgaggtc
gaaaagcttaagattgttattggcaatattcccgagggttcgaatgtggttcaacttctc
tctggacccaatgttgatgacttggctgcttcttacatatcttctgtggaaagttttgaa
aaggaagctcattcaatatttcgtgagcttggaggtcgcggtaatcttggggacgcagct
acaaatacagatggttcaacagctgctacaggttctcttgttcaagttcaatcccaaagc
acggcatctctggctgctcctggagctagcagtttaccaccaaaagccactggagaaagt
gagaaaagacttgcattaccattatccaaagctagtgttgaaactcgtcgaacaggtaga
aaattggtcaggcctagactcgtaagaccggatgagccacaaggtgacactgaaatgtca
gatgccgaaggaccactgggcaagactgggccgtctagtgacacagagacaagtaatttt
gctcaatcatctcaaccattggctcgtaaacgtcttgctccgacatccagttctgagtta
cgtgaagaatcagttgcatctggagagaagagctctgatgtagtagcacctgtgttgaag
aagtcaaaagggtcagagtcaccagaagagagtacagaagaacaacctgctgcagctctg
gaatttactggcagtcaacaagcaactgaagaattatttgatagcagtgagttgccacaa
ggccaaaatgaggaaggtgaagtccaaaatgaagacggtgaaattgctgttggcaatgac
gaggaatccaaagatccacaacacttggatggtacaagtcatgaggaattaccaggggac
agaactggaattttagatgagaatccggatcaacctgatgagatgcggagggatcacact
gacgcagacaaccagcagtcaatattggcgcccagtggtgagagagaagagggagaattg
ttgccagatgctggagatcttgagggtggtagtgatttgtctaacattgtggagaaccaa
gaatctcgggaaggtcaatctgagtctgctgcaacccctgaacgttccccagcacgaggg
gatgatgatgctttagaggctggtgagattaactctcctgagctatcaagcgatgataag
aatgatgagcctgacttggttgaggaggctgccgatggttctgacaagttaattgatgtt
aatgagccaatatcagttgagagtgatcaggtagctgacccgacacctgttgtgagtgat
gcttctactttgactagtagtgttatagaaagcagttcgtcaaaggtgaacatacctgtt
ccaaggcaaggaacccccaccgccccctctgaaacagaagagacaacaaagcaggcatca
cctattggtagtacttcgactaccataaatttgtcagagcgagcacgggaaagggcacaa
atgagacaggctggtttggtttctacccctaatgttactagaggtcgcggaagagctgct
ccccgtggacgcggtcgtggtcggacagtagtacgccggcctcctccatcatctggtggt
gaaccatga
DBGET
integrated database retrieval system