Vigna umbellata (ricebean): 124832009
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Entry
124832009 CDS
T09662
Name
(RefSeq) cyclin-dependent kinase D-3-like isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03022
Basal transcription factors
vum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124832009
09124 Replication and repair
03420 Nucleotide excision repair
124832009
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vum01001
]
124832009
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124832009
03019 Messenger RNA biogenesis [BR:
vum03019
]
124832009
03400 DNA repair and recombination proteins [BR:
vum03400
]
124832009
Enzymes [BR:
vum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
124832009
2.7.11.23 [RNA-polymerase]-subunit kinase
124832009
Protein kinases [BR:
vum01001
]
Serine/threonine kinases: CMGC group
CDK family
124832009
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124832009
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
124832009
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124832009
BRITE hierarchy
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Kinase-like
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
124832009
NCBI-ProteinID:
XP_047162070
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MAAPDPSKKVADRYLKREVLGEGTYGVVYKAIDTHTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIVELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADTKSYLQMT
IKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARMFGSPDRRFTHQVFARWYRAP
ELLFGAKQYGSGVDVWASACIFAELLLRRPFLQGTSDIDQLGKIFSAFGTPTASQWPDMV
YLPDYVEYQYVPAPPLRSLFPMATDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLP
SDPDKLPRPAPKRESKASDFNLQEGPTVLSPPRKSRRVMPERDGFEGNSQQADKVDGGFG
DFRQTTDDNSGKNESAPMSVDFSIFGLKPPNRPTINSADRTHLKRKLDLEFQQPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccggatccgtccaaaaaagtggctgatagatatctgaagcgtgaagttctt
ggtgaaggtacctatggagttgtgtacaaagccattgacacccacacaggacagacagtt
gcaattaagaaaattcgacttggcaagcagaaagaaggggtaaattttacagctcttaga
gaaataaagcttcttaaagagcttaaggatcctaatattgttgaattgatagatgcattc
ccacataaagggaatttgcatcttgtgtttgaattcatggagacggaccttgaagctgtc
atacgagatcgaaatatttttctttcaccggctgatacaaaatcttaccttcaaatgacg
ataaaaggtcttgcttattgccacaagaaatgggttttgcatagggatatgaagccaaat
aatttgttgataggatctaatggacagctaaaacttgcagattttggtttagcacgaatg
tttggaagcccagatagaaggttcactcatcaggtttttgctcggtggtatagagctcct
gagctattatttggtgccaagcaatatggctctggggttgatgtttgggcttcagcttgt
atatttgctgaacttcttctccgtcgaccctttttgcagggtacaagtgacattgatcaa
ttaggaaagatcttttcggcatttggcactccaacagcttctcagtggcctgatatggta
tacctgcctgattacgtcgaataccaatatgttcctgcaccccctctgcgttctttgttt
ccgatggctactgatgatgctttagatttgttatcaaagatgtttacatatgatccaaaa
gctagaatttcagtgcagcaggcactagagcataggtacttttcttctgctcctctgcct
tcagatccagacaagctccctagacctgctcctaagagggaatctaaggcttctgatttc
aatttacaggagggtcctactgtattatcacctccaaggaagtctaggagagtgatgcca
gaacgggatgggtttgaaggaaattcccaacaagcagataaggttgatggcggttttggt
gatttcagacagacaactgatgataattcaggcaagaatgaatcagctccaatgtctgta
gatttttctatctttggattaaaacctccaaatagacctacaattaacagtgctgataga
acacatttaaaaagaaaattagatctagaatttcaacagccagaatga
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integrated database retrieval system
