KEGG   Vigna unguiculata (cowpea): 114162910
Entry
114162910         CDS       T06017                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114162910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vun03021]
    114162910
Enzymes [BR:vun01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     114162910
Transcription machinery [BR:vun03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     114162910
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 114162910
NCBI-ProteinID: XP_027902706
LinkDB
Position
9:39014996..39020564
AA seq 1201 aa
MGHVGSSKGGTKAGMTAAMMDIDDDVSDDDLGDLDPTNAEILEEFGGEDAFRYHCKKFSM
LFFEEYGLISHQINSYNHYVTVGLQRTFDGFGDLVVTPGFDPSKKGDNEHYRYASVKFGK
VKLDKPMCWGGELNNQELKMLPRHARLQRMTYASKMKISVKVQVYVPKKIRSDKFKTGKE
EFLDKEILKEDEKEIIIGKLPVMVKSDLCWMKGEKDDCEFDHGGYFLIKGAEKTFIAQEQ
LYLKRLWVINSPGWMIAYKSQMKRNRMVIKLVGNSRTEEGENGDMFLNVYFLSVEVPVWV
LFFALGVQSDKEVVDLIGCDNDDVRIQNILFASVRDADEKCGSAFGRGRNAVQYLEKCIK
SVQFPPPESIEECLEIYLFPGISGLKRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRL
ELANELLDRELKVHIAHVRKRMSKALQRDLYGDRDVRPIEHYVDASIISNGLQRAFSTGA
WSHPYKRMERISGVVATVGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFL
STPDGENCGLVKNMAVTGLVSTDVSNASESILPTLLDCGMEELVNDTETHLGNKEKIFLN
GDWVGVCPDSSWFVAELRSKRRKNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVSNL
LKIKRFKSERYSFLTLLEEGVVELIGPEEEEDCCTAWGVQYLFGKEGKRSVKYTHCELDM
SFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTLNPNIRVDTLSHRLHYPQRPLF
QTMTSDCLGKPTPLGQSKIHPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFR
SEHIRSYKSEIDNKDSSDKRRKPEDIINFGKLQSKIGRVDSLDDDGFPYVGANLQSGDII
IGRCAESGADNSVKLKHTERGYVQKVLLSSNDEGKNFAAVSLRQVRSPVLGDKFSSMHGQ
KGVLGFLECQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGTLRHATP
FSTPSVDAITDELHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFR
NTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICTQC
KNVSNVILRPVSGGRKVRGPYCRHCESADDIVVAHVPYGAKLLCQELFSMGINLKFDTQL
C
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgggtcacgtcggttccagcaagggtggcaccaaggcagggatgaccgccgcgatgatg
gatatcgacgatgacgtaagcgacgacgacctcggtgacctcgacccgaccaacgccgaa
atcctcgaagaattcggcggagaagacgcattcaggtaccactgcaagaagttctcgatg
ctgttcttcgaggagtacggtctgatcagccaccaaataaactcctacaaccactacgtc
accgtcggccttcagagaaccttcgacggcttcggcgacttggtcgtaacgcccggcttc
gacccttccaaaaagggagataacgagcactaccgttacgcctccgtcaagttcggcaag
gtcaagctcgacaagcccatgtgctggggcggtgagttaaacaaccaagagttaaagatg
cttccgcgtcacgcgcggcttcagaggatgacctacgcgtcgaaaatgaaaatctcagtt
aaagttcaggtgtatgttccgaagaagattcggagtgataagttcaagactgggaaggaa
gagttccttgataaggagattctgaaggaagacgagaaggagatcatcattgggaaattg
cctgtcatggtcaagtcggatttatgttggatgaaaggtgaaaaggatgattgtgagttt
gaccatggaggttactttctcatcaagggtgccgagaagacttttattgcacaggagcaa
ctgtatttaaagaggctttgggttataaacagtccaggttggatgattgcctacaagtca
cagatgaagagaaataggatggttattaaactggtaggcaattctaggactgaagaaggg
gagaatggagacatgtttcttaatgtttattttttatctgttgaggttcctgtgtgggta
ctatttttcgcacttggtgtccaatctgataaagaagttgtagatctcattggttgtgac
aatgatgatgttagaattcagaatattctctttgcgtctgttcgtgatgctgatgagaaa
tgtggcagtgcatttggtaggggtaggaatgcagttcaatatttagagaagtgtataaag
agtgtccaatttccgcctcctgagtctattgaggagtgccttgaaatttatctctttcct
gggatcagcggcttaaagagaaaggcacgcttccttgcatatatggtgaagggtctcttg
ctggcttataccggccgcagaaaatgcgacaacagggatgatttccgtaataagaggctt
gaattggccaatgagcttcttgaccgtgagctgaaagtgcacatagcacatgttcggaag
agaatgtccaaggcactgcaaagggatctctatggagatagagatgtacgccccattgag
cattatgttgatgcgtcaataatttcaaatggtttgcaaagggcattttcaacaggagca
tggtcacatccgtacaagaggatggaaaggatctctggtgtggttgcaactgtagggcgc
actaatcccttacaaaccatggctgagctaagaagaacgaggcagcaagttcagtacacg
ggaaaagttggggatgctagatatccgcatccttctcactggggcaaggtttgttttctc
tctaccccagatggtgaaaattgtggactagtaaaaaatatggctgtcacgggactagta
agcactgatgtatctaatgcatctgaatctatactgcctacattgttggattgtgggatg
gaagaacttgtcaatgatactgaaactcatctgggaaacaaggaaaaaattttcctaaat
ggtgattgggttggagtgtgccctgattccagttggtttgtggctgagctacgaagtaaa
agacgaaaaaatgaactgcctcatcaggtggaaatcaagagagatcaatctcaacatgaa
gtgcgtatttactctgatgcaggaaggattctacgtcctcttttagtagttagtaatcta
ctaaaaattaaaagatttaaatcagaacgttattctttccttactctactggaagaaggt
gttgttgaactaattggacctgaagaagaggaagactgctgtactgcttggggcgttcag
tatttatttggaaaagaggggaaaagatctgtcaagtacacacattgtgaacttgatatg
tctttcttattgggtttaagttgttcacttgtcccatttgccaatcatgaccacgcaagg
agggtgctctaccaatctcagaagcactcctcacaggctattggcttttctactttaaac
ccaaatattagagttgatactttgtctcatcggttacactatccccaaaggccccttttt
caaacaatgacttcagattgtctgggaaaaccaactccactgggtcaaagtaaaattcat
ccaaagccagaattctataatgggcagaatgcaattgtggctgtcaatgtacatctggga
tacaatcaagaggattccttggtgatgaaccgggcttcattgcagcgtggtatgttcagg
tctgagcacataaggagttacaaatctgaaattgataataaggattcttcagataagagg
cgcaaacctgaagacattataaattttggaaagcttcaaagtaaaattggtcgagttgat
agtcttgatgatgatggctttccatatgttggggcaaatttgcaaagtggtgatattatt
attgggcggtgtgctgagtctggtgcagacaatagtgtgaagttaaagcatactgaaagg
ggttatgtacaaaaggttttgctgtcttcaaatgacgaggggaaaaattttgcagcggtt
tcattgagacaggttcgaagtccagttcttggtgacaagttctccagtatgcatggacaa
aagggtgttttgggatttctggagtgtcaggaaaattttcctttcactagacaaggcatt
gttcctgatattgtcattaatccgcatgcctttccctcacgacaaactcctggccaactc
ctagaggctgctttaggaaaggggattgcttgtggtggtacactgagacatgctacgcct
ttctccactccttctgttgatgccattactgatgagcttcacagagctgggttttcgaga
tggggaaacgagagggtatacaatggaaggactggtgagatggtccgatcactcattttt
atgggaccaacattttaccaacgtctgcatcatatgtctgaagacaaggttaaattccgc
aacaccggtcctgttcacccgttgacccgacagcctgtagctgacagaaaacgatttgga
ggtatcaagtttggtgaaatggagcgtgattgcttgatagctcatggtgcttcagccaac
ctgtatgaacgcctctttacacttagtgactcgtctcagattcacatctgcacccaatgc
aaaaatgtttcaaatgtgatcttgcgcccagtctctggtggccggaaagtacgaggtcct
tattgccgccactgtgaatccgcagatgacattgtggttgcccatgttccatacggggca
aaactgttatgccaggagctctttagcatgggcataaatcttaaatttgatacccaactt
tgctag

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