Vigna unguiculata (cowpea): 114176524
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Entry
114176524 CDS
T06017
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03020
RNA polymerase
vun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114176524
09124 Replication and repair
03420 Nucleotide excision repair
114176524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114176524
03019 Messenger RNA biogenesis [BR:
vun03019
]
114176524
03400 DNA repair and recombination proteins [BR:
vun03400
]
114176524
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
114176524
Messenger RNA biogenesis [BR:
vun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114176524
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114176524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
114176524
NCBI-ProteinID:
XP_027917393
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All DBs
Position
3:15315991..15319788
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AA seq
176 aa
AA seq
DB search
MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATV
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccacatagtactggagcgaaatatgcagctccatccacgctactttggtcgt
aaccttcgtgataatcttgtttccaagctaatgaaagatgtggaaggcacttgcagtggt
cgacatggatttgtggtggcagttacagggatagaaaacatagggaaagggttaattcgt
gatggaacagggtttgtgacatttcctgttaagtaccaatgtgttgtcttcagaccattt
aagggggagatcttggaagctgttgtcaccatggtgaacaagatgggattttttgctgaa
gctggacctgtacaaatctttgtttccaaccacttgattccggatgatatggagttccag
tctggggacatgccaaattacactacttcagatggatcggttaagattcaaaaagatagt
gaagtcagactaaagataattgggactcgagtggatgctactgaaattttctgcataggt
accataaaagatgatttcttgggtgtgatcaacgaccctgcaacagtttaa
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