KEGG   Vigna unguiculata (cowpea): 114177274
Entry
114177274         CDS       T06017                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
vun  Vigna unguiculata (cowpea)
Pathway
vun03020  RNA polymerase
vun03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vun00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114177274
  09124 Replication and repair
   03420 Nucleotide excision repair
    114177274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vun03021]
    114177274
   03400 DNA repair and recombination proteins [BR:vun03400]
    114177274
Transcription machinery [BR:vun03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     114177274
  RNA polymerase III system
   RNA polymerase III
     114177274
  RNA polymerase I system
   RNA polymerase I
     114177274
DNA repair and recombination proteins [BR:vun03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114177274
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 114177274
NCBI-ProteinID: XP_027918353
LinkDB
Position
1:complement(28068758..28072762)
AA seq 237 aa
MAAENGLELERVGGEGEEQEEAEEVKGCLSKFIDDGTVETHRYYLSRRTTLEMLRDRGYS
IPSTEIDLSLSQFRNMHGHSPDPDRLRLSLTHATNPSKRILVIFCGPGSVKVTAIRNIAG
QIVNRDTLSGLILIVENHVTSQALKAVALFSFKVEIFQITDLLVNITKHVLKPKHQVLTD
RQKKNLLKKFNIEEKQLPRMLQSDAVARYYGLERGQVVKVTYSGEITQMHVTYRCVW
NT seq 714 nt   +upstreamnt  +downstreamnt
atggcagctgagaacgggttggagttggagagagtgggaggagaaggagaagaacaagaa
gaagcagaagaagtcaaaggttgtttgagcaagttcatcgatgatggcaccgttgaaact
cacagatactacttgtctcgcagaaccactctggaaatgctcagagacagaggttactcc
attccctccaccgaaatcgacctttctctctcccaattccgcaacatgcacggccattcc
cccgaccctgaccgtctccgcctctccctcactcacgccaccaacccttccaaaaggatt
ttagtcattttctgcgggccaggttctgtgaaagttactgccattcggaacattgcgggg
cagattgttaatagagacactttgagtggtcttattttgatagtggagaatcatgttact
agccaggccttgaaagccgttgctcttttttccttcaaggttgaaattttccagatcaca
gacttgcttgttaatattacaaagcatgtgttgaagccaaagcatcaggtgctgactgat
aggcagaagaaaaatctcctgaagaagttcaatatagaagaaaagcagcttccccgcatg
ctacagagtgatgcagttgcacgatattatggacttgagaggggccaagtagttaaagtt
acctatagtggtgaaatcacccagatgcatgtcacgtatcgatgtgtgtggtga

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