Vigna unguiculata (cowpea): 114187501
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Entry
114187501 CDS
T06017
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
vun
Vigna unguiculata (cowpea)
Pathway
vun03020
RNA polymerase
vun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114187501
09124 Replication and repair
03420 Nucleotide excision repair
114187501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114187501
03400 DNA repair and recombination proteins [BR:
vun03400
]
114187501
Enzymes [BR:
vun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114187501
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114187501
DNA repair and recombination proteins [BR:
vun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114187501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
114187501
NCBI-ProteinID:
XP_027931565
LinkDB
All DBs
Position
6:31671734..31679244
Genome browser
AA seq
1194 aa
AA seq
DB search
MDLEEEQEYDQQMMEEDDDEDDITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYRISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
FASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEDGGWH
DLVSKGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRTSTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH
SISLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEIKSTKDQKKKGA
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaagaggaacaagagtacgatcagcaaatgatggaggaagacgacgacgaa
gacgatatcacgcaagaggatgcgtgggctgtcatctccgcctatttcgaagagaaaggc
ctcgttcgtcagcaactcgattccttcgacgagttcatccaaaacactatgcaggaaatc
gtcgacgaatccgccgacatagaaattcgacccgagtcgcagcataatcccggtcaccaa
tctgatttcgccgagactatttacagaatcagcttcggccagatttacttgagtaagccc
atgatgacggagtctgatggagaaaccgctacgttgtttcccaaggctgctaggttaagg
aacctcacctattcagctcctttgtatgttgatgtctccaaaagggtcatcaagaagggg
cacgatggtgaagaagtcaccgagactcaagatttcactaaagttttcattggcaaggtt
cctataatgcttcggtctagttattgcacgttgtaccagaattcggagaaggatttgact
gaacttggagagtgtccatatgatcaaggcgggtatttcattattaatgggagtgagaag
gttctgattgctcaggagaagatgagcaccaaccatgtctatgttttcaagaagaggcag
cccaacaagtatgcctatgtggctgaagttagatcaatggccgagtctcagaacagaccg
cccagtactatgtttgtgcgcatgctctctcggactagttccaaagggggttcttcagga
caatatatacgtgccacacttccttatattcgaactgaaattcccatcattattgtgttt
cgagcgttggggtttgttgctgacaaagatatacttgaacatatatgctacgatttctca
gatactcaaatgatggagttgcttcgtccttccctagaagaagcgtttgttattcaaaat
caacaagttgcacttgactacattgggaaaagaggtgcaactgttggtgtaaccaaggaa
aagagaattaagtatgctaaggagatcctccaaaaggagatgctccctcatgtgggtgtt
ggagagtattgtgagaccaagaaagcatactattttggttatatcattcaccggctactt
ctttgtgcacttgggcggagggctgaggatgatagggatcattacggcaacaaaaggctg
gatctggctggccctctacttgggggtctttttagaatgttattcagaaagctaacgaga
gatgtcaggggatatgtacagaagtgtgttgataatgggaaagatgttaatctacaattt
gctatcaaagcaaaaaccatcacaagtggacttaaatactcactagctactggtaattgg
ggacaagcaaatgcggcagggaccagagcgggagtttcacaggtgctgaatcgtttaact
tttgcgtcaactttatctcacttgcgaagactaaattccccaataggacgtgaagggaag
ttagctaaaccaagacagctgcataattctcaatggggaatgatgtgtccagcagaaaca
cctgaaggacaagcttgtggacttgtgaagaatctggcattgatggtctacataacagtt
ggttcagcagcatatcctattctggagtttttggaagaatggggcactgagaattttgag
gaaatttctcctgctgtgattccccaagctactaagatttttgtaaatggttgctggatg
ggtatccatcgtgaccctgatatgttggtgagaactttgaggaagttgagacgtcgggtt
gatgttaatactgaagttggggttgtcagagatattcgtcttaaagaattgcgaatatat
actgattatggtcgctgcagtcgtcctttattcattgtggataagcaaaggcttctcata
aagaagagggatattcatgctttacaacagagggaatcccctgaagatggtggatggcat
gacctagtgtccaagggctttatagaatatattgacacagaagaagaagagactacaatg
atttccatgacaattaatgatcttgttcaagctaggctcaacccagaagaggcatattct
gatacatacactcattgtgaaatccacccatctctgattttgggtgtgtgtgcctctatc
ataccatttcccgatcacaatcagtccccacgtaatacttatcagtctgcaatgggaaaa
caagcaatggggatatatgttaccaactaccagtttcgaatggataccttggcctatgtt
ttatattatccacaaaagccactggtcactacaagagcgatggaacatcttcatttccgc
caactccctgctggaattaatgccattgtggcaatttcctgttattctggttacaatcaa
gaagattctgtcatcatgaaccaatcatcaatagaccgtggattctttcgatctcttttt
ttccgatcatatagagatgaagagaagaagatgggaaccctagtcaaagaagactttggc
cgaccagatagaactagcaccatgggcatgagacatggttcttatgataagctggatgat
gatggtcttgcaccaccaggcacacgagtatctggtgaggatgttattattggaaaaacc
accccaatatctcaggaagaggcacaggggcaggctttacgttacacgaggcgtgatcac
agcataagcttacgtcacagtgaaactggaatggttgatcaagttctgctgactacaaat
gctgatggattgagatttgtgaaagtaagagtgagatctgttcgcataccacagattggt
gacaaattcagtagtagacatggtcagaaggggacagttggtatgacttatacacaagag
gacatgccctggactgtggaaggcatcacccctgatattattgtcaatccacatgctatt
ccatcccgaatgacaattggtcagcttattgagtgtatcatgggtaaggtggccgctcac
atgggaaaggaaggagatgcaactccttttacagatgttactgtggacaatatcagcaaa
gctctgcacaaatgtgggtaccaaatgcgtggttttgagactatgtacaatggtcataca
gggagacgtctgagtgcaatgattttccttggtcctacatattaccaaagactgaagcat
atggttgatgacaagatccattctcgtggacgtggtcctgtgcagatcctcacaaggcaa
cctgctgagggacgctcacgcgatggaggtctccgatttggagagatggaacgagactgc
atgattgctcatggagctgctcatttcctaaaggagagattgtttgatcaaagtgatgca
tacagggtccatgtgtgtgagcgctgtgggttgatagccattgcaaatctcaagaagaat
tctttcgagtgcagggggtgcaagaacaaaacggacattgttcaggtttacatcccttac
gcatgtaagttgcttttccaagagttaatggccatggccatagcgccaagaatgcttacg
aaggagatcaaatctacaaaagaccaaaagaagaaaggagcctga
DBGET
integrated database retrieval system