KEGG   Vitis vinifera (wine grape): 100243758
Entry
100243758         CDS       T01084                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 6B
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03020  RNA polymerase
vvi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100243758
  09124 Replication and repair
   03420 Nucleotide excision repair
    100243758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100243758
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100243758
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100243758
  RNA polymerase III system
   RNA polymerase III
     100243758
  RNA polymerase I system
   RNA polymerase I
     100243758
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100243758
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 100243758
NCBI-ProteinID: XP_002282723
UniProt: E0CTZ1
LinkDB
Position
12:join(1854852..1854886,1857487..1857520,1857625..1857791,1857876..1857927,1858875..1858942,1859075..1859144)
AA seq 141 aa
MADDDYNDMDMGYEDEPPEPEIEEGAEEDADNNNNEDIPDAIETAEKEQVPVERSRKTSK
YMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGSY
EDWGVDELIVEDSWKRQVGGD
NT seq 426 nt   +upstreamnt  +downstreamnt
atggcggacgacgactacaacgatatggatatgggatatgaggatgaacctccagagcct
gagattgaagagggtgcagaggaggatgctgataataataataatgaagacattccggac
gctatcgagactgcagaaaaagaacaggtgcctgtagaacgttctcgaaagacttccaag
tatatgacaaaatatgaaagggcaaggatcttgggtacccgtgctctgcagatcagcatg
aatgcgcctgtgatggttgagttggagggtgagactgacccacttgagattgcgatgaaa
gaacttcgtgagaggaagatacccttcaccattcggcgctacctgcctgatggaagttat
gaagactggggggttgatgaattgattgtagaagactcatggaagaggcaagtgggtggt
gattga

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