KEGG   Vitis vinifera (wine grape): 100253791
Entry
100253791         CDS       T01084                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03020  RNA polymerase
vvi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100253791
  09124 Replication and repair
   03420 Nucleotide excision repair
    100253791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100253791
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100253791
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100253791
  RNA polymerase III system
   RNA polymerase III
     100253791
  RNA polymerase I system
   RNA polymerase I
     100253791
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100253791
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 100253791
NCBI-ProteinID: XP_002279544
UniProt: D7TMV8
LinkDB
Position
16:complement(join(20800536..20800605,20800711..20800778,20801360..20801411,20801504..20801673,20801778..20801811,20804384..20804418))
AA seq 142 aa
MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDVPDALEEQEKEVHETVERPRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGD
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggacgaagagtacaacgacgtggatatgggatatgaggatgagccgccagagcct
gagattgaagagggtgcagaggaagaagccgaaaataataacaatgaagatgttccagat
gctcttgaagagcaagaaaaagaagtacatgagacggtagaacggcccagaaagacttca
aagtatatgacaaaatatgagagagcaagaatcttgggtacccgtgctctgcagatcagc
atgaatgcgcctgtgatggttgaattggagggtgagacagatccacttgagattgcaatg
aaggaacttcgtgagcggaagatacccttcaccatccgccgctacctgcctgatggaagt
tatgaagattggggagtggatgaattgattgtagaggattcatggaagaggcaagttgga
ggtgattga

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