Vitis vinifera (wine grape): 100258072
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Entry
100258072 CDS
T01084
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100258072
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vvi01007
]
100258072
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvi03016
]
100258072
Enzymes [BR:
vvi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
100258072
Amino acid related enzymes [BR:
vvi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
100258072
Transfer RNA biogenesis [BR:
vvi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100258072
Prokaryotic type
100258072
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
WHEP-TRS
Seryl_tRNA_N
Desulfoferrodox
Motif
Other DBs
NCBI-GeneID:
100258072
NCBI-ProteinID:
XP_019081468
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All DBs
Position
16:join(3608589..3608645,3608800..3608898,3608967..3610472)
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AA seq
553 aa
AA seq
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MTAPKSFQSPLTTSQIHLPKERRNLQKEVLAALFITSEKPEELPARTAKPRPGLLVSLEL
NDGSYPANLQVIVDAAVAPLGQLVQISTCVHVESSLKVPPEGTKQRVEFRVEKVHHVGPV
DPAKYPLPKTRLTLEFLRVFVHFRSRTNMIPAVARICNALAYATHTFFLNHGFLHAHTPI
ITTSDCEGAGEMFQVTTLISDAEKVKKELIKNPSPSEADIEAAKALVKEKGEAVAQLKSA
KASMGEITASVAELNKAKENLSRLEERSKLKPGIPQKDGKIDYSQDFFARQAFLTVSGQL
QVETHACAIGSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLKDDMNCAEAYVKFLC
QWLPDNCIDDMEFMAKNFDKGSIDHLRMVASMPFERISYAEAIKLLEEAVKKDKKFENKV
EWGIDLASEHERFSAEVLFKKLVIVHDYPRGIKAFYMRLNDDMKTVAADKPLRQEVNIHY
NSNSGNDSGNNSTEESSSPTDFDLHESLEPILLNQASLVKAWHGHFWAIVPFPISPSLIL
KNILLNPFLQIIF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgactgccccaaaatccttccaatcaccattgacaacgtcccaaattcatctacccaaa
gagaggcgaaatctgcagaaggaagttttagctgctttgtttatcacttctgagaagcct
gaggagttgcctgcaagaacagctaaacccaggccaggtttgcttgtttcccttgaactc
aatgacgggtcctatccggcgaaccttcaggtcatcgttgacgccgccgtagcgcctctg
ggccagctcgtgcagatcagcacgtgcgtgcacgtggagagctcgctcaaggttcctcct
gaggggacgaagcagagggtggagtttagggttgagaaggtccatcacgttggtcctgtg
gatccagccaagtatccgttgcctaagaccaggctaaccctcgagtttctaagagttttt
gttcactttcggtcaagaaccaacatgattcccgcggttgccagaatatgtaatgcattg
gcttatgctacccacacattcttcctaaatcatggctttctccatgcgcacactccaatt
atcaccaccagtgattgtgagggtgctggtgaaatgtttcaagttacaaccttgattagt
gatgcggaaaaggtgaaaaaggagcttattaagaatccttctccatcagaagctgacatc
gaagctgccaaggcacttgttaaggagaaaggagaggctgttgcccaactaaaatctgct
aaagccagtatgggggaaatcaccgcatctgtggctgaacttaacaaggctaaggagaat
ctctcaaggctggaagagcgatctaagcttaagcctggtatccctcaaaaagatgggaag
attgattattcccaggatttctttgcccgtcaagcatttttgactgtttctggccaactg
caagttgagactcatgcatgtgctattggcagtgtttatacatttgggccaactttccga
gctgaacactctcacacatcaaggcatttggcagaattctggatggtggagcctgaaata
gcatttgcagatcttaaggatgatatgaattgtgcggaggcctatgtgaaatttctttgc
cagtggttacctgacaattgcattgatgatatggaattcatggctaaaaattttgataaa
ggctccattgatcatctaagaatggttgcatcaatgccctttgagcgaatttcatacgca
gaggcaatcaaacttctggaggaagcagtcaagaaagataagaaatttgagaataaagtg
gaatgggggattgatttagcatctgagcatgaaagattctcggcagaggtattatttaag
aagcttgttattgttcatgattacccaagaggaattaaagcattctacatgaggcttaat
gatgacatgaagactgtagcagctgataagccactgaggcaggaagtgaatatacattac
aatagcaacagtggcaacgacagtggcaataatagcacagaggagagctccagccccaca
gactttgacctccatgaaagcttggagcccatcctccttaatcaagcctcattggtgaaa
gcttggcatggccatttttgggccatagtgccatttcccatttcaccttctctaattttg
aaaaatattcttttaaatccctttcttcaaataattttctag
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