KEGG   Vitis vinifera (wine grape): 100264262
Entry
100264262         CDS       T01084                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X2
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100264262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100264262
Enzymes [BR:vvi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     100264262
Transcription machinery [BR:vvi03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     100264262
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 FtrD-like
Other DBs
NCBI-GeneID: 100264262
NCBI-ProteinID: XP_010659064
LinkDB
Position
13:join(21586118..21586179,21586297..21586378,21586583..21586704,21586975..21587067,21587893..21587965,21588038..21588128,21588215..21588267,21591115..21591179,21592547..21592652,21592766..21592876,21604335..21604394,21606081..21606119,21606225..21606275,21606358..21606456,21613411..21613470,21613565..21613657,21615053..21615154,21615262..21615372,21615506..21615622,21623422..21623538,21623651..21623731,21624195..21624299,21624449..21624529,21624619..21624750,21624848..21624892,21631486..21631563,21631630..21631769,21631893..21631983,21633010..21633134,21633209..21633344,21633443..21633573,21646014..21646139,21646224..21646279,21658555..21658625,21659946..21660030,21660107..21660210,21662703..21662831,21665657..21665707)
AA seq 1157 aa
MRFKEESVEEKLDHIKRKQEEMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSF
NYFVKTDIKKIVRANDRIVSSVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMT
YAAPILVNIEYITGSHVQKTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLD
PGGYFVVKGTEKVILIQEQLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIW
LQLNQFTSKIPIMIVMKAMGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQAL
EFLERKVKKLPFYNPSLEKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAI
LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQ
FIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRK
VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLE
LLSGEELHTPNSFLIIFNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVY
IASDGGRVCRPVVIADKGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIA
LYEADAKPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCR
MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR
GFGRCIVMKKFSAVNQRYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIY
INKESPIITKGPLISPVGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLI
RHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIE
LLGGKAGVSCGRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQA
YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA
SMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLF
QELQAMNVVPRLKLTEA
NT seq 3474 nt   +upstreamnt  +downstreamnt
atgcgattcaaggaagagtctgttgaagaaaagcttgatcatattaaaagaaagcaagaa
gagatgtctatccacaagcattttcctgctgatcctgtcaaacaagctgtggacaagttc
cctctccttcctgagtttttaaaggtgagaggactggtgaagcaacatttggattcattt
aattactttgttaaaaccgacataaagaagattgttcgtgctaatgatcgcatagtatca
agtgtggacccaagtatttatctgaggtttaaagatgtccgaattggtgaaccatcaata
acagtggatggtatcagtgaaaaacttaatcctcatacctgtcggctatctgacatgacg
tatgctgctccaatattggttaatatagagtatattacagggagtcatgttcaaaaaacc
agagtggagaagaatgatgttgttattggaagaatgcctatcatgttacggagctgttgc
tgtgttttatataaaaaggatgaagctgaacttgcaagactcggtgaatgtccccttgat
cctggaggatattttgttgtaaaaggaaccgagaaggtgatcttaatacaagaacaactc
tcgaagaacagaataatcattgacactgataagaaggggaacataaatgcatctgttaca
agcagcaccgagtcaacaaaaagcaaaacagttattgtcatggagaaagaaaagatatgg
ttgcaacttaatcagtttacatcaaagattccaattatgatagtgatgaaggccatggga
atggagagtgatcaagaggtggtgcagatggttgggagaaatcctcgatatagtgcccta
cttttgccttctatggaggaatgtgcgagtcatggtatatacacccaacagcaagctttg
gaattccttgagaggaaggtgaaaaagttgccgttttataacccttcacttgaaaaggaa
ggaagaggaatggctatcctacgtgatacatttattgctaatgttccggtacgtcagaat
aactttcgtccaaagtgtttgtatgttgcggtgatgttaagacgtatgatggatgctatt
ttaaataaggacgcaatggatgacaaggattatgtagggaacaagcggttggagttgtct
ggccagttgatttctctgctctttgaggatttgttcaagacgatgattagtgaggtcaag
aagacgatagatgccatccttgcaaagcctagccgctctagccggtttgacttttctcaa
ttcatagtgagagatagtattactgttggcctagagaggaccctttctactggcaactgg
gatgtcaagcggttcaggatgcacagaaagggcatgtcacaggtggtagctaggttatct
tatatagggtcattggggcacatgacaaaaatctccccacaatttgaaaagtcgagaaaa
gtaagtggacctagagcattgcaacctagccagtggggtatgctctgcccatgtgatact
cccgaaggtgaagcttgtggactggtaaaaaacttggccctgatgactcatgtaacaact
gatgaagaagagagtccactaatatctctgtgttactctttgggtgttgaagacttggaa
ctactttctggcgaagagcttcatacaccaaattcttttctgattatatttaatgggctc
attcttggcaagcataggaggccccagcgttttgctaatgcattgaggaagttacggaga
gctggtaaaattggggagtttgtaagcgtttttgtaaatgagaagcagcattgtgtttac
attgcttctgatggaggtcgagtttgtcgtccagttgttattgctgacaagggcaaatcg
cgaatcaaggaacaccatatgaaggaattgattgatggagttcgcacttttgatgatttt
ttacgtgatggattgatcgagtatcttgatgtcaatgaggagaacaatgctttgattgct
ctatatgaagctgatgctaaaccagaaacgactcatattgaaatagagcctttcaccatc
ttaggtgtttgtgctgggttgattccttttcctcatcataatcagtccccaagaaatacc
taccagtgtgcaatgggaaagcaagctatggggaatatcgcatataaccagctatgtcgg
atggactcattactgtacttactagtgtatcctcagcggccattgttgacaacaagaaca
attgagctggtaggatatgataagcttggagcggggcagaatgcaacagttgctgtaatg
agttacagtggctatgacatagaagatgcaatagtcatgaacaagtcatccttagatcgt
ggttttggtcgttgtattgtaatgaaaaagttttctgctgtcaatcaaaggtatgagaat
aatgcatcagacagaatagttagacccctgaaagtgggacatgatgcagaaaggatgcag
atattggatgatgatggacttgctgcccctggagaaataattaaaccgaacgatatctat
atcaataaagagtcccctatcattacaaagggtccattaatatctcctgtgggattacca
gatagtgcatataaacccagtagacagacattcaagggtcctgaaggggaggcatctgtg
gtggatagagtagcactctgttctgataagaatagcaatctgtgcattaaatttctaatt
cggcatactcgtaggccagaggttggagacaaattcagtagtaggcatgggcaaaaaggt
gtttgtggcacgattattcaacaagaggatttcccattttctgaacgtggcatttgccct
gatttaattatgaatcctcatggatttccgagtcgaatgacagtggggaagatgatagag
cttcttggaggtaaagccggagtttcatgtggtaggtttcattatggcagtgcctttgga
gagccaagtggtcatgcagacaaagtcgagactataagtaaaaccctcgtgaagcatggc
tttagctacagtggcaaggacttcatttattcaggtatcacaggctgtccactacaagca
tatattttcatgggaccaatttactaccaaaagttgaaacacatggtcctagataaaatg
catgctcgaggtagtggtccccgtgtcatgctaacgagacaacccacagaagggagagct
cgaaatggaggactacgggttggagaaatggaaagagattgtttgattgcttatggtgca
agcatgctgatttttgaacgattaatggtatctagtgatcctttcgaagttcaggtttgc
agggtgtgtggcttactaggatattacaatcataagctgaaaattggcatttgttctact
tgtaaaaatggggataatatttctaccatgaaacttccctatgcatgcaagcttttattc
caggagcttcaagcaatgaatgttgtccctcgcttaaaactgactgaggcatga

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