Vitis vinifera (wine grape): 100264944
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Entry
100264944 CDS
T01084
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Module
vvi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100264944
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
100264944
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100264944
NCBI-ProteinID:
XP_002274125
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Position
12:complement(join(8734709..8734936,8735038..8735553,8735668..8735976,8736063..8736197))
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AA seq
395 aa
AA seq
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MGLKLNIAGTSLLLLLASAAEVSGDIIFDVTKYGARADGHSDISQALLKAWGDSCSSPVA
STVMIPNGTYALGQITIGGPCKAPINFVVQGTVMAPVDTSRFKAEAGWIAFQQIDQFTLS
GGGVFDGQGKTVWGRKCPHYAYCKQLPINLRFNFITNSMVKDITSRDSKQFHINLLGCKN
LAFYNVAISAPDESLNTDGIHIGRSSGINITDSTIETGDDCVSIGDGSEQINIQRVTCGP
GHGISVGSLGKYPNEEPVVGISVKNCTLTNTQNGVRVKTFPASHQGIASEMHFEDIVMNN
VGNPIIIDQEYCPHNQCNLKSPSRIKLSNVSFRNIRGTTSTQVAVKLLCSQGVPCQDVEL
GDINLKYNGKEGPAMSQCKNIKPNLLGVQLPRICA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaaattgaatatcgctggaacctctcttctgctattgctagcctctgctgca
gaagtgtctggtgatatcatttttgatgttaccaaatatggtgccagggctgatggacac
tccgatatcagccaggccttacttaaagcatggggagactcttgttcatcgcctgtggca
agtacagttatgattccaaatggaacatatgcgttggggcaaataaccattggaggcccc
tgtaaggctcctattaatttcgttgtccaaggcactgtgatggccccggtggataccagc
aggttcaaggctgaagctggttggattgcgtttcaacaaatcgaccagttcacattgtct
ggtggtggagtttttgatggtcaaggaaaaactgtatggggcagaaaatgcccccattat
gcatattgcaaacaacttcccatcaatctgaggttcaacttcatcaccaatagcatggtc
aaggacataacttcaagagacagtaaacagtttcatattaatcttttggggtgcaagaat
ttagctttctacaacgttgcaatcagtgcaccagatgagagccttaacacagatggaatt
cacattggacgttcctcggggatcaatatcaccgattcaaccatagaaactggagatgat
tgcgtctcaattggtgatggcagtgagcaaattaatatccaaagagtaacctgtgggcct
ggtcatggcatcagcgtgggaagtctaggaaagtaccccaatgaagaacctgtggttggc
attagtgtcaagaactgcaccctcaccaacacccagaatggcgtgagagtgaagacattt
cctgcttcccatcaaggcattgcctctgaaatgcattttgaagatattgtcatgaataat
gttggcaatcccataatcatagatcaagagtactgcccccataaccaatgcaacttgaag
agtccatcacgcattaagctcagcaatgttagcttcagaaacatccggggcaccacctca
actcaggttgctgtcaagcttctttgcagccagggagtaccatgccaagacgtggaactt
ggtgacatcaacctgaaatacaatggaaaggaaggccctgccatgtcacagtgtaaaaac
attaagccaaatctattgggcgtgcaactgccaaggatttgtgcataa
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