KEGG T01084: 100267354

Vitis vinifera (wine grape): 100267354

Entry

100267354         CDS       T01084

Name

(RefSeq) DNA-directed RNA polymerase III subunit 1

K03018

DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]

Organism

vvi Vitis vinifera (wine grape)

Pathway

vvi03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100267354
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vvi03021]
    100267354
Enzymes [BR:vvi01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     100267354
Transcription machinery [BR:vvi03021]
Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     100267354

SSDB

Motif

Pfam:

RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4

Other DBs

NCBI-GeneID:

100267354

NCBI-ProteinID:

XP_059593422

LinkDB

Position

6:complement(join(4718076..4718127,4721513..4721715,4721851..4722055,4723036..4723106,4723244..4723357,4723438..4723593,4724181..4724332,4724449..4724596,4730525..4730794,4730889..4731092,4736305..4736403,4743584..4743775,4744038..4744272,4746079..4746172,4748819..4749020,4754625..4754813,4757567..4757707,4757798..4757939,4758024..4758172,4758265..4758480,4759065..4759164,4759298..4759410,4760738..4760922,4766189..4766366,4771259..4771408,4775404..4775533,4775692..4775753))

AA seq 1383 aa
MKDGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLL
DPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVL
LDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAV
SVLGIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLL
NLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTG
STSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRV
EYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLI
RYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMP
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST
QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLL
RPHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGL
FSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYEN
CHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQC
GSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLT
ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYG
DDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETVKRLKEHNTSAEGC
SDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFL
DTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN
GAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDME
GIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNL
LPTVVVKGIETVERAVINKDNKVKYNLLVEGTGLQTVMGTEGVIGRETTSNHIIEVQQTL
GIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLML
ASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELSYGLDP
IIS

NT seq 4152 nt +upstreamnt +downstreamnt
atgaaagacggtatacagttcactaaagagccctacatcgaggatgttggacctcgcaaa
atagagagcattcggttcgcgttgttttccgaatccgaaattagcaaagctgcagaagtt
caagtgtggcgtggcgtttactatgatgctaatagaaaacctatagaaaacgggttattg
gatcctcgcatgggacctgcaaataagaatggtacttgtgcaacatgccttgggaatttt
cgggattgtccggggcattgtgggtacttgactctcgcactccctgtttataatgttgga
tatttgagtacaattgtggacatcttgaagtgcatttgcaagtcttgttctcgtgtactt
ttggatgagaaagcatctaaagactacttgaagaagatgagaagtcaaaaaatggaggct
ctaaagaaggccgaattaatgaaaaagatagtacaaaaatgtacagctatggcaagtagt
aagaaagcagtgaaatgttccagatgcgggtatatgaatggtattgtgaaaaaggctgta
tctgttttgggaattatccatgatcgttcaaaaattgctgatggaagcttggaagaatgc
agttcagcaatttctcacaccaaagagtccaaggcatcattcagtgttgttgatattctt
aaccctgtcaaagttctttctctttttaaaaggatgatggatgaggattgtgatttgctt
aatcttgctgaaagaccagaaaaacttgttttaacgaacattggagtgccacccatcgct
attcgtccttcagtttttatggatggtggaacacagagcaatgaaaatgatgttactgag
aggctaaagcggattattcaagcaaatgctagccttcatcaagagttacaggacacaggc
tccacatccaaatgtctggctggttgggattatcttcaaattgaggttgcccagtatatc
aacagtgatgttcgtggtgttccactagctatgcaagctgccaggccattgagtggtttc
gttcagcgcctcaaagggaagcaggggcgttttcgtgggaacttgtctgggaagcgtgtt
gagtatactggcaggactgttatatcgcctgaccctaatctaaaaattaccgaggtggca
atccccatcctgatggctaagatcttaagttatcctgaacgtgtttctcatcacaatata
gagaagctgagacaatgcattctcaatggtccttttaaataccctggtgcgaagcttatc
agatatcctgatggttctatgaggtctttgatgtttagtggcagaaagcgctttgctgat
gaactgaaatatggttacatagttgagcgtcacttggaagatggcgatgttgttcttttt
aacagacaaccaagtttgcatcggatgtcaatcatgtgccatagggcgcggataatgcct
tggagaacattgaggtttaatgaatcagtttgcaacccatataatgcagattttgatggt
gatgaaatgaatatgcatgtcccacagacagaagaagctcgcacggaggctcttatgttg
atgggggtgcaaaataacttatgtacaccaaaaaatggagagatcttggttgcttcgacc
caagattttctaacatcttccttcctgattacgaggaaggacactttttatgaccgcgca
gctttttcgctcatgtgttcatatatgggtgatggcatggatcttgttgatttaccaaca
ccagcaataattaagccagtggagctgtggactggtaaacagttatttaatgttctactg
cgccctcatgcaaatgtgagagtctatctgaatcttactgtcatggagaaaacctacaac
aagcgtagaggaaaagaaacaatgtgtcctagtgatgggtttgtctatttccgaaatagc
gaactaatatctgggcaacttgggaaggctactttaggaaatggcaacaaggacggtctt
ttctctgttcttcttagggactataatgcacatgctgctgctgcttgtatgaatcgtctg
gcaaaattgagtgctcggtggatagggaatcatggcttctcaattgggattgatgatgtt
caaccaggagggcttttgaatgaccagaaaagtaagaggattgaggaaggatatgaaaat
tgtcatgagctaatacagcagtacaataaagggaagctgaaacttcaacctggttgcaat
gctgcccaaactcttgaagccgaaataactggtgtattaaataaaattcgagaaacaact
gcgaatgtttgcatggaagaactacattggaggaatagccctttgattatgtcccaatgt
ggttccaaaggatctcctatcaatattagccaaatgattgcatgtgtaggtcagcaatcg
gttgggggtcgtcgtgctcctgatggatttatagatcgaacccttcctcatttccctaga
aagtctaaaaccccagatgctaaaggttttgttgccagttcattctatactggtttgaca
gctacagagtttttctttcatacaatgggaggacgagaaggtcttgttgatacggcggta
aaaacagctgacaccgggtacatgtctcgtagattaatgaaagcattagaggacctgtcc
attcagtatgatgaaacagtacgaaatgccaatggaagcatagttcaatttctttatgga
gatgatggtatggatccagcaaggatggaaggaaaagacggctttcctttgaattttaat
agattgtttttgaaagtgaaggctacatgtcccgcaggagaaaatgcaagtttatctgct
ttacaaattgaggagactgtgaaaaggctcaaagaacataatacatctgctgagggttgt
tctgatgccttcaagaccaatctatcaggtttccttgaagaatgtaaagaaaaatttaaa
aacacgagggaggcacttggattacatggagagcatgttggggaagaaaatttagatatc
caagaaaaatttgccaaaaatatatctggtattacttccaaacagttgcaggtttttctg
gatacctgcatctctcgttatcaattaaaacgaattgaagctggaactgcaattggtgca
attggagctcatagtattggagagcctgggacacagatgacattaaaaactttccacttt
gctggtgttgcaagcatgaatgttacacttggagttcctcgtatcaaagaaataataaat
ggagccaaaagaattagcacacccatcatcactgcagctcttgagtgcaataataatgtg
aaaaccgcacgaatggttaaaggtcgcattgagagaacgactttaggccaggtagcaaag
agtataaagattgtcttgacttcaagactagcgttaatagctgtcgcacttgacatggaa
ggaattcaggcttcacaattgtctatagattctaatattgtaagagaatcaattttgcga
aaccgacgaatcaaactgaagcaacagcatattaaggttttggatgctggaaagttggaa
gttcatcctcagggtgatagaagtacaattcattttgaactccatgctcttaaaaatttg
cttccaactgtggttgtaaagggaatagaaactgttgaacgtgctgtgattaacaaagat
aacaaagtaaagtacaacttgcttgtagaaggcacaggtctccaaactgtcatgggcact
gaaggagttattggacgtgaaactaccagtaatcatatcattgaagtgcagcagacactt
ggaattgaagctgcaagaaagtgcatcattaatgagatacagtataccatggcaagccat
gggatgagcatagatatacgacatatgatgcttttagcagatttgatgacatttagaggt
gaagttctaggaatcacaagatttggcattcaaaaaatggacaaaagtgtattgatgctg
gcttcatttgagaagacagcagatcaccttttcaatgcttctgtaagtggtagagatgac
aagattgaaggagtaagtgaatgcataatcatgggtatacccatgcaactgggcactgga
atacttaaagttagacagaggcttcagcaagttccagagctgagttatgggttagaccca
attatatcttaa

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