KEGG   Vitis vinifera (wine grape): 100268096
Entry
100268096         CDS       T01084                                 
Name
(RefSeq) rDNA transcriptional regulator pol5
  KO
K02331  DNA polymerase phi [EC:2.7.7.7]
Organism
vvi  Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100268096
   03400 DNA repair and recombination proteins [BR:vvi03400]
    100268096
Enzymes [BR:vvi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100268096
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    100268096
DNA repair and recombination proteins [BR:vvi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    100268096
SSDB
Motif
Pfam: DNA_pol_phi
Other DBs
NCBI-GeneID: 100268096
NCBI-ProteinID: XP_010648046
LinkDB
Position
3:complement(join(10180811..10181670,10183500..10183938,10185634..10185939,10186395..10187546,10187760..10187987,10188858..10189055,10189152..10189277,10190690..10191241))
AA seq 1286 aa
MGSKKRGLESIEEAEDEGPIDKVESEQSKKKLKKEKKKDGENASAASVKPMERRKKRKAL
DKERHGVSSENHESKPVQTGSELKDADDIKEQPASSPSSGLPEFHITVFKDLVSINASVR
EAAVETMVMELQEVQKVYDKLGKKELVERGLQLEAEKDDGLNNCAPSLRYAVRRLIRGVS
SSRECARQGFALGLTILVNKIPSIKVQSFLKLIVDLLEVSSSMKGQEAKDCLLGRLFAYG
ALVRSGRLVEEWISDKNTPYIKEFTSLIISLAAKKRYLQEPAVSVILDLVEKLPTEALLS
HVLEAPGMNDWFEGATEVGNPDALLLALKIREKNSLDSKIFDKLLPNPFSPSKLFATSHL
SSLVNCLKESTFCQPRIHSVWPVLVNSLLPDVVFQDEDVVSSSSIKKHKRSRKCSSSEED
IAKNLRCFCEVLIEGSLLPSSHDRKHLAFDVLLLLLPRLPASFIPIVLSYKLVQCLMDIL
STKDTWLHKVAQYFLKELSDWVRHDDVRKVSVIMALQKHSSGRFDCITRTKTVKDLMAEF
KTESGCMLFIQNLTSMFVDEGHASEEPSDQSQTTDDNSELGSAEDKESVGPSGNSDFLRS
WVVDSLPSILKYLKLDPEAKFRVQKEILKFLAVQGLFSSSLGTEVTSFELQEKFRWPKAA
TSSALCRMCIEQLQLLLANAQKGEGQKVEGQEGEGPRALTSIREPIDLGSYFMRFLSTLR
NIPSVSLFQTLSNEDEKAFTKLQAMESRLCREERNCLQERNLRLSATANKLHALRYLLIQ
LLLQVLLRPGEFSEAASELILCCKKAFSSSDLLESSGEDELDGDETPELMNVLVDTLLSL
LPESSAPMRSAIEQVFKYFCDDVTDDGLLRMLRVIKKDLKPARHQDAESEDDSDDDDDFL
DIEEAEEIDEAETGETGESDEQTDDSEAVVGVEAVEEIPEASDDSDGGMDDDAMFRMDTY
LARIFKERKNQAGGETAHSQLVLFKLRVLSLLEIYLHENPGKPQVLSVYSNLAQAFVKPH
TAEGSEQLGQRIWGILQKKIFKAKEYPKGEAVQLSTLESLLEKNLKWASKPFKKKRSSEN
PSKKKQSASRNRHKMIGSLAQNSIFWILKILDARKFPESELQGFFDIFKRVLVGYLDSKK
IQIKSNFLKEIFRRRPWIGHHLLGFLLEKCGNAESEFRRVEALDLVIEILKSHVFFNTGV
KGQEASKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFLK
DLPPDAHVACETHLGEAFLALKKLGR
NT seq 3861 nt   +upstreamnt  +downstreamnt
atgggtagtaagaaaaggggtttagaatccatagaggaagcagaggatgaggggcctatt
gataaagttgaatctgagcaatcaaagaaaaaattgaaaaaggagaagaagaaagatggg
gaaaatgcaagtgcagcttctgtcaaaccaatggagagaaggaagaaaaggaaagcattg
gacaaagagaggcatggggtttcttctgaaaatcatgaatcaaagccagtgcaaacaggt
tcggaattgaaagatgctgatgatatcaaggagcagccagcttcttcacccagcagtggt
ttgccagaattccatattactgtttttaaagacttggtatcgatcaatgcttcagtaaga
gaagcggcagtagaaacgatggtgatggagttgcaggaagttcaaaaggtgtatgataag
cttgggaaaaaggagctggttgagcgtgggctgcaattggaagctgaaaaggatgatggt
cttaacaactgtgctccttctttgagatatgctgttcgtaggcttatccgtggggtctca
tcctcaagagagtgtgcaagacaaggttttgctctgggtttgactatcttagtcaataaa
attcccagcatcaaagtgcaatcattcctgaaacttatagttgatttgttagaggtttct
tcttcaatgaagggtcaggaagcaaaggattgtcttttaggtcgcttatttgcttatggt
gcccttgttcgatcaggaagactagttgaagaatggatttctgataaaaacactccctac
atcaaggaattcactagtcttattatctcgcttgcagccaagaagcgatacctgcaagag
ccagccgtttcagttattttggacttggttgaaaagttacctactgaagccttgttgagt
catgtacttgaagctccgggaatgaatgattggtttgagggagccacagaagttggaaac
cctgatgcgttgctcctagctctgaaaataagagaaaaaaattctctggacagcaaaata
tttgacaaactcttgccaaatcctttcagccccagcaagctctttgccacaagccactta
tcatcccttgtcaattgcttaaaggaatctaccttctgtcaaccaagaatccacagtgtt
tggcctgttttagtaaatagtcttttgcctgatgttgtatttcaagatgaagatgtggta
tcttcaagttccattaagaagcacaaaaggagtcgcaagtgtagctcttctgaagaagac
attgcaaaaaacctccggtgtttctgtgaagttcttattgaaggatcccttcttccgtca
tctcatgaccgcaaacacttggcatttgatgttctgcttcttctcttaccaaggttgccc
gcatctttcatcccaattgttctttcttacaaacttgtccagtgcttgatggacatactt
tctaccaaggacacttggctgcataaagttgcacagtattttcttaaagaactatcagat
tgggtcagacatgatgatgttagaaaagtttctgtcatcatggctctacagaagcacagc
agtgggagatttgattgcattacacggacaaaaactgttaaagatttgatggcagagttc
aaaacagaatctggatgcatgttgtttattcagaacttaactagcatgtttgtggatgaa
ggtcatgcttcggaggaaccttctgatcagagtcagacaacagatgacaattcagagcta
ggttcagcagaggataaggaatctgttggaccatcaggaaattctgattttctgagaagt
tgggtcgtagattccctccctagtatcttgaaatatctgaagctggatcctgaagcaaag
tttcgggtgcaaaaagagatattgaagtttctagctgttcagggtctattttcttcatct
cttggcactgaagtgacatcatttgaattacaggaaaaatttaggtggccaaaagcagcc
acctctagtgctctttgcaggatgtgtattgagcagctccagttattactggcaaatgct
cagaaaggagagggtcagaaagtagagggtcaggaaggagaggggccacgagcattgaca
agcatacgtgaaccaattgatcttggttcttacttcatgcgatttcttagtacattacgc
aatattccttcagtttcactctttcagacattgagcaatgaggatgagaaggcattcact
aaattgcaagctatggaaagtaggctttgtagagaggaaagaaactgtcttcaggaaaga
aacttgaggctcagtgcaacagcaaataaactgcatgctctcaggtacttgctcatccag
ttgctgctgcaagtactccttcgacctggggaattctctgaagctgcctctgaacttatt
ctatgttgtaagaaagccttctcttcttctgatctccttgaatcctctggtgaagatgag
ttagatggtgatgaaacacctgagttaatgaatgtccttgtggatacattactctcattg
ttgccagagtcatcagctccaatgcggtctgccattgagcaggttttcaaatatttctgt
gatgatgtcacggatgatggactgcttcggatgttgcgtgtcattaagaaagacctaaaa
cctgctagacatcaggatgcagagagtgaagatgatagtgatgatgatgatgattttctt
gatattgaagaagctgaggaaattgatgaagctgagacaggtgaaactggtgagagtgat
gagcaaacggatgactctgaggcagtggttggagtagaggcagttgaagaaattcctgaa
gcttctgatgattctgatgggggaatggatgatgatgcaatgttccgaatggatacttat
ctagcaaggattttcaaagagcgcaagaaccaagctgggggtgagacagctcattcacaa
cttgtgctcttcaaacttcgagtcctttccttgctggaaatttacctgcatgaaaatcca
ggtaaaccccaggttttgtcagtgtactcaaacttggctcaggcatttgttaagccacac
actgcagaaggtagcgagcagcttggacagcgcatatggggaattctgcagaagaaaatt
ttcaaagcaaaggaatatccaaagggtgaagctgtgcaactttctacacttgaatctctg
ctggaaaaaaacttgaagtgggcttcaaaaccatttaagaagaagagatcttctgaaaat
ccgtccaagaagaaacagtcagcttccaggaaccgtcataaaatgattggttctcttgct
cagaattcaatattttggattttgaagatccttgatgcaagaaagttcccagagtctgaa
ctgcaggggttttttgatattttcaagcgtgttctagtggggtatcttgatagtaaaaag
attcaaattaaatccaattttttaaaagaaatatttagaagacgaccatggattgggcat
catctcttaggcttccttttggagaaatgtggcaatgcagaatcagagttccggcgagtt
gaagctcttgatctggtgattgaaatattgaagtcacatgtgttttttaacactggtgta
aaaggtcaggaggcatcaaagaaaatgttgaaaagccatctgcctaaacttggccttcta
ataaaggtgttagtaacaaatatgccagaaaagcaggcaaggcgtactcatgtgcggaaa
ttctgtggcaaggtcttccagatgatatcaacctctaacctgaccaagtcttttctcaaa
gatttgccacctgatgctcatgttgcttgtgaaacccaccttggtgaggcttttcttgct
ttgaagaagctgggacgctag

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