Vibrio vulnificus 93U204: VV93_v1c30920
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Entry
VV93_v1c30920 CDS
T03294
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvl03009
]
VV93_v1c30920 (rimO)
Enzymes [BR:
vvl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
VV93_v1c30920 (rimO)
Ribosome biogenesis [BR:
vvl03009
]
Prokaryotic type
ribosomal protein modification factors
VV93_v1c30920 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AIL72160
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All DBs
Position
II:98130..99539
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AA seq
469 aa
AA seq
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MTVQTFTPNQTTTLDTAKKTIEQQSQELTPSGGNKIGFVSLGCPKNLVDSERILTQLRTE
GYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIREVH
PGVLGITGPHAYENVLEHVHQFAPKPEHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRC
TFCIIPSMRGDLVSRPVGEILSEAERLKNAGVKELLVISQDTSAYGVDSKHSLGFANGSP
VRQNIKALSEELGKMGIWVRLHYVYPYPHVDDLIPLMAEGKILPYLDIPFQHASPNVLKA
MKRPGRAERTLDQIKKWREICPELVIRSTFIVGFPGETDEDFEMLLEWLKEAQLDRVGCF
KYSPVEGAAANDIDDQISEEVKQERFERFMLVQQEISAAKLQKRIGSTMKVIIDEVDEEG
AIGRTYADAPEIDGLVYLNGETSLKAGELVDVLIEHADEYDLWGSLVRA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacagttcaaacgtttacgccaaaccaaaccacgacgttggatacggccaaaaaaacc
atcgagcaacagagccaagagttaacgccaagcggcggtaacaaaatcggtttcgtctca
ttaggttgtcccaaaaacctcgttgattctgaacgaatcctgacgcaacttcgcaccgaa
ggctatgaaatcgtcaacagctaccacgattcggacgtggtgatcgtcaacacttgtggc
tttattgatagcgcagttcaagagtcgctcgacaccattggcgaagcgctaaaagagaac
ggcaaagtgatcgtgactggttgcttgggcgcgcgtgaagatgaaattcgcgaagtgcat
ccgggcgttttaggcattacgggtccacatgcgtatgaaaacgtgttagagcacgtgcat
cagtttgcaccaaagccagagcacaacccgtttaccagcctcgtgcctgatcacggcgtg
aagctgacgccaaaacactatgcgtacctaaaaatatcggaaggctgtaaccaccgttgt
accttctgcatcatcccgtcgatgcgtggtgacttggtcagccgcccggtgggagaaatc
ctcagtgaagccgaacgcctgaaaaacgcaggggtgaaagagctattggtgatcagccaa
gacaccagtgcctacggtgtggacagcaaacacagcctgggttttgctaacggttcacct
gtgcgtcaaaacatcaaagcgctgagtgaagagctgggcaaaatgggcatttgggtgcgc
ctgcactacgtttacccatacccacatgtggatgatttgatcccgctgatggcggaagga
aaaatcctgccttacttggatattccattccagcacgccagcccgaacgtactcaaagcg
atgaagcgccctggccgtgcggaacgcacgctcgatcaaatcaaaaaatggcgtgagatc
tgtcctgagttggtgattcgctcaacctttatcgttggtttcccaggcgaaacggatgaa
gatttcgagatgctgctagagtggctaaaagaagcgcaattggatcgcgtgggctgcttc
aaatattcgccagtagaaggcgcggcagcaaacgacattgacgatcagatctcagaagaa
gtgaagcaagagcgttttgagcgtttcatgctggttcaacaagaaatcagtgcggcgaag
ctgcaaaaacgcattggcagcaccatgaaagtgatcatcgatgaagtagacgaagaaggc
gcgattggccgcacctacgcggatgcaccagaaatcgatggtttagtttacctcaacggt
gaaaccagcctcaaagcaggtgagttggtggacgtgcttatcgagcacgctgacgaatac
gacctgtggggatcgttggttcgcgcctag
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