Vibrio vulnificus MO6-24/O: VVMO6_03638
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Entry
VVMO6_03638 CDS
T01415
Name
(GenBank) GGDEF family protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VVMO6_03638
Enzymes [BR:
vvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VVMO6_03638
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Cortex-I_coil
Motif
Other DBs
NCBI-ProteinID:
ADV88660
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Position
II:complement(752180..754072)
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AA seq
630 aa
AA seq
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MADIDTSQLIVPDSVLKSWQEIVDLVAKMTQCPAALIMRIHENDIEVFSSSRSENNPYAQ
NAKDSLGHGLYCETVISERRMLNVPNALNDPEWDHNPDIKLGMICYCGLPVFWPDDTPFG
TICMLDSQERYFDEDAMSLLGRFQTAIEGQLETLYRKEELTQLNQELEQKVAERTKTLAD
LSSRLLTEIEQRTAAESHLDFHLHYDPLTKLPNRITLADDLAEQMASLEDDEQITLIYFS
LKNFKFVNASYGYMFGDQILSSLSQRICHKLPKKWKLARIVGSDFVLAAQHLRKPEIQEQ
VIERITKACTQPFNVNDMSVNLQCHLGVALAPMDATDSFSLIQRACSAMSEGKNEGLQVS
YFNFAAQKAAEERLQLESHLSEALKNNELEVHFQPIICLKQGGKIIGAEALLRWNNPTLG
QVSPDRFIPLAESNGQIIEIGYFVLHQALKQAAEWHRASPHAFKVAINISPIQFRERHFV
QHLQDIIDLYQLPAKCIELELTEGILLQDEEYAQNVLAQLRQFGVSISLDDFGTGYSSLS
YLQKYAFDTLKIDRSFINQLEHNQHNRELTRAIIAMAHKLNMMVIAEGVEDRYQEDFIRT
EECNYAQGFLYGKAVPADDFSQQLASSQQF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatagatacctctcaattaatcgttccggattctgtactcaagagctggcaa
gaaatcgtcgatttggttgccaaaatgacgcaatgtcctgcagctctgatcatgcgtatt
cacgaaaacgacatcgaggtgttttccagcagtcgtagcgaaaataacccctacgcgcaa
aatgcaaaagattcgcttgggcatggcctgtattgtgaaaccgtgattagcgaacggcgc
atgttgaatgttcccaatgcgcttaacgatcctgaatgggatcataatccagacatcaaa
ctgggcatgatatgttactgcggactgcctgtgttttggccagatgacaccccgttcggc
accatctgtatgcttgatagccaagagcgctactttgatgaggacgcgatgtcattactt
ggccgctttcaaacggccattgaaggacaattagaaaccctttaccgtaaagaagagctt
acccaactcaaccaagagctggaacaaaaggtcgcagaaagaaccaaaacactcgccgat
ctgagtagccgattgctgactgaaatcgaacaacgaaccgcggctgaaagccatttggac
tttcaccttcattacgacccgctcacaaaactccccaaccgaattaccttggcggacgat
ctcgccgaacagatggcttctttggaagatgatgagcaaattactctgatctatttcagt
ttgaaaaactttaagtttgttaacgcaagctatggctatatgttcggtgatcaaatttta
tcctctctgagccaacgcatttgtcacaagctgcctaagaagtggaaactggcaagaatt
gtcggatcggatttcgtcttagcagcgcagcatctgcgcaaacccgagatacaagaacaa
gtcatcgaacgcattaccaaggcgtgcacccaaccgtttaacgtcaacgatatgagtgtc
aatttgcaatgtcatttaggggtcgcattagccccgatggatgcaacagactcatttagc
cttattcagcgagcgtgctctgcaatgagcgaaggtaaaaacgaaggtttgcaggtctct
tattttaattttgccgcacaaaaagccgcagaagagcgcttgcaactggagtcacatctc
tctgaagcactcaagaacaacgaacttgaagtgcattttcagccgatcatttgcttgaaa
caaggagggaaaatcatcggtgccgaagcactactgagatggaataatccaacgcttggg
caagtctccccagatcgatttattcctttagcggaaagtaacggccaaattattgaaatc
ggctacttcgttttacatcaagcattgaaacaagcagcggaatggcatcgcgcatcacct
cacgcgtttaaagtggcgattaacatctcccccatccagttccgtgaacgacactttgtg
caacacttacaagacattattgatctttaccaattgccagcaaaatgcattgaactggaa
ctgactgaaggtattctgctgcaagatgaagagtatgcgcaaaacgtcctcgctcagttg
cgtcagtttggtgtcagcatctcgcttgacgactttggtaccggttactcttcactcagt
tatctgcaaaaatacgctttcgatacgctaaaaattgatcgcagttttatcaatcagttg
gaacacaatcagcacaatcgagaactgacaagagccatcatcgccatggcgcacaaactc
aatatgatggtgatagcggaaggggtagaagatcgataccaagaagacttcattcgaacc
gaggaatgcaactacgctcaaggctttttgtatggcaaggcggttccggctgacgatttc
tctcaacaattagcgagtagtcagcaattttaa
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