Vibrio vulnificus CMCP6: VV1_0981
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Entry
VV1_0981 CDS
T00108
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu00071
Fatty acid degradation
vvu00280
Valine, leucine and isoleucine degradation
vvu00310
Lysine degradation
vvu00362
Benzoate degradation
vvu00380
Tryptophan metabolism
vvu00410
beta-Alanine metabolism
vvu00640
Propanoate metabolism
vvu00650
Butanoate metabolism
vvu00907
Pinene, camphor and geraniol degradation
vvu00930
Caprolactam degradation
vvu01100
Metabolic pathways
vvu01110
Biosynthesis of secondary metabolites
vvu01120
Microbial metabolism in diverse environments
vvu01200
Carbon metabolism
vvu01212
Fatty acid metabolism
Module
vvu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VV1_0981 (fadB)
00650 Butanoate metabolism
VV1_0981 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VV1_0981 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VV1_0981 (fadB)
00310 Lysine degradation
VV1_0981 (fadB)
00380 Tryptophan metabolism
VV1_0981 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VV1_0981 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VV1_0981 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VV1_0981 (fadB)
00930 Caprolactam degradation
VV1_0981 (fadB)
Enzymes [BR:
vvu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VV1_0981 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VV1_0981 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VV1_0981 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VV1_0981 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
DAO
Motif
Other DBs
NCBI-ProteinID:
AAO09471
UniProt:
Q8DDK6
LinkDB
All DBs
Position
I:983284..985455
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKEVQDGVAEILFCAPNSVNKLDLATLASLDKALDALTAHSGLKGVMLTSD
KEAFIVGADITEFLGLFAKPEEELDQWLQFANSIFNKLEDLPVPTVAVVKGHTLGGGCEC
VLATDLRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRAEEALK
IGLLDAVVDSDRLYASALQTLTDAINEKIDWKARRQQKTSALTLSKLEAMMSFTMAKGLV
AQVAGPHYPAPMTAVVTIEEGARFARNQALDIERKHFVKLAKSEEAKALVGLFLNDQYIK
GIAKKAAKSANKETQRAAVLGAGIMGGGIAYQSALKGVPVIMKDIAQASLDLGMTEASKL
LNKQLERGKIDGFKMAGILASITPSLHYAGIDNADIIVEAVVENPKVKAAVLSEVEEQVS
EETVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTQIDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAQGFPERMGKQGRDAIDALFEANKYGQKNGSGFYTYTMDKKGK
PKKAFSDEIVPILAPVCAAQQAFDDQTIIQRMMIPMINEVVLCLQEGIIASAQEADMALV
YGLGFPPFRGGVFRYLDSVGIANFVAMAQQHVELGAMYQVPQMLIDMAEKGQTFYGAQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaagtacaagatggagtggcagaaatc
cttttctgcgcgccaaattccgtcaataagctcgatctagcaacccttgcttcactcgac
aaagcgcttgatgcgctcaccgctcactccggtctgaaaggcgtaatgcttacatcagac
aaagaagcctttattgtcggagcagatatcactgagtttttaggactgtttgccaagcca
gaagaagagctcgaccaatggcttcaatttgccaatagcatcttcaataaattggaagat
ttgcccgttccgactgtcgcggttgtcaaagggcataccttaggcggtggatgtgagtgt
gtacttgctaccgatttacgcattggtgataaaaccaccagcattggtcttcctgaaacc
aaactcggcattatgcctggctttggcggttgtgtgcgtttgccgcgcgtgatcggcgca
gacagcgccatggaaatcatcactcaaggcaaagcttgccgtgcagaggaagctctaaaa
attggtttgcttgatgctgtcgtcgattccgatcgcctctacgcatccgccctgcaaaca
ctcaccgatgccatcaatgaaaaaattgactggaaagcacgtcgccagcaaaaaacctca
gcgttaacgctaagcaaactcgaagcgatgatgagtttcaccatggccaaaggcttggtg
gctcaagtagcagggccccactaccctgcaccaatgaccgccgttgtcacgattgaagaa
ggtgcccgttttgcacgcaatcaagcgttagacatcgaaagaaaacatttcgttaaactg
gcgaagtcagaagaagccaaggccttggtgggtcttttcctcaatgaccaatacatcaaa
ggcatcgcgaagaaagcagcaaaatccgccaataaagagacccaacgtgcagcagtgctg
ggcgcaggtattatggggggcggcatagcctaccaatctgctctcaaaggtgtgcccgtg
atcatgaaagacatcgcccaagcatcactggatctgggcatgacggaagcgtcaaagcta
ctcaataaacagcttgaacgtggcaagattgatggctttaaaatggccggcattctcgct
tctattacaccaagccttcactacgcgggcatcgataacgccgatatcattgttgaagcc
gtggtcgaaaacccgaaagtgaaagcagccgtgttaagtgaagtggaagagcaagtgagc
gaagagaccgttctcacctcgaacacctcgaccattccaattaacttgctggccaaatca
ctcaaacgaccagagaacttctgtggtatgcacttcttcaacccagtgcatcgcatgcct
ttagtcgaaatcattcgtggcgaacacacctccgatgaaaccatcaaccgtgtcgttgct
tacgcagccaaaatgggcaaatccccaatagtggtcaatgactgcccagggttctttgtg
aaccgcgtgctgttcccatactttggcggttttagcatgttgctgcgcgatggtgccgac
ttcactcaaatcgataaagtgatggaacgtaaattcggttggccaatgggccctgcttac
ttattggatgtggtcggtattgataccgcacaccacgctcaagccgtcatggcgcaaggg
ttccctgagcgcatgggtaaacaaggtcgcgatgcgattgatgccttgtttgaagccaac
aagtatggccagaaaaacggcagcggtttctacacgtacaccatggacaagaaaggcaaa
ccgaagaaagcattcagtgatgagatcgtaccgattcttgctcctgtttgtgccgctcaa
caagcctttgatgatcaaaccattatccaacgcatgatgattccgatgatcaacgaagtg
gtgctttgcttgcaagaaggcatcatcgcctcagcgcaagaagcggatatggcgctggtg
tatggccttggtttccctcctttccgtggtggtgtattccgctacttagatagtgttggt
attgcaaactttgtcgcaatggcacagcagcatgttgaacttggcgctatgtatcaggtt
ccacaaatgcttattgatatggctgaaaaagggcaaaccttttacggcgcgcaacagcaa
ggttctatctaa
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