Vibrio vulnificus YJ016: VV0186
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Entry
VV0186 CDS
T00150
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03030
DNA replication
vvy03410
Base excision repair
vvy03420
Nucleotide excision repair
vvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV0186
03410 Base excision repair
VV0186
03420 Nucleotide excision repair
VV0186
03440 Homologous recombination
VV0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvy03032
]
VV0186
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV0186
Enzymes [BR:
vvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV0186
DNA replication proteins [BR:
vvy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VV0186
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VV0186
NER (nucleotide excision repair)
GGR (global genome repair) factors
VV0186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
BAC92950
UniProt:
Q7MQ24
LinkDB
All DBs
Position
I:195994..198867
Genome browser
AA seq
957 aa
AA seq
DB search
MRERGFTGLDVASLADHFILCWITTTMATIPENPLILIDGSSYLYRAFHAYPGTMSNGDI
PTNAVYGVVNMLRSMMRQFASDRIAVVFDAKGKTFRDDMYPEYKANRPPMPDELRCQIEP
LHQVIKAMGLPLIAIEGVEADDVIGTLAYQASQQGMPVLISTGDKDMAQLVDDNITLINT
MTNVVMDREGVIEKFGIPPELIIDYLALMGDKVDNIPGVPGVGDKTATALLQGIGGLSQL
YDHLDDIAALSFRGSKTMAKKLVDNKDNALLSYQLATIKLDVALQETPESLLKTEPNKDE
LIKLYGQLAFKSWLNELLEGGTGVVEADEKAQTSVRSGASPVESEINNAAANIDRSQYQT
IFDQATFDIWLDKLKASELFAFDTETDSLDYMVANLVGLSFAVAEGEAAYVPVAHDYLDA
PEQLDRDWVLAQLKPLLEDDTKAKVGQNLKYDASVLARYGIEMKGIKHDTMLASYVYNSV
GGKHDMDSLALRFLQHSCISFEQLAGKGKNQLTFNQIDLNEAAVYAAEDADVTLRLHNRL
FANIEQDEKLNAIYQEIEVPLVPVLSRMERTGVLIDDMKLSAQSQEIAVRLGELEQKAYE
IAGQPFNMNSPKQLQTILFEQMGLPVIKKTPSGTPSTAEEVLQELALDYPLPSVIMEYRG
LAKLKSTYTDKLPKMINPHTGRVHTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQA
FVAPHGYKILAVDYSQIELRIMAHLSGDQALLDAFQQGKDIHAATAAEIMGVSIEQVSSE
QRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQTYMDKYFERYPGVMQYMEDTRSNASQH
GYVETIFGRRLHLPEITSRNVMRRKAAERAAINAPMQGTAADIIKKAMLLVDQWIQEEGN
GRVKLLMQVHDELVFEVEESCLTEIESKVQQLMESAAQLNVPLVAEAGHGDNWDQAH
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagcgtggattcactggattagacgtggcatccttagcagatcattttattctc
tgctggataacgacaactatggccactattcctgaaaatccattaattcttattgatggc
tcttcttacctctatcgagcgtttcatgcctatcctggcaccatgagtaatggtgatatc
ccaaccaatgcggtctacggtgtggtgaacatgctgcgcagcatgatgcgtcagtttgct
tctgatcgtattgcggtggtgttcgacgccaaaggcaaaacctttcgcgacgatatgtat
ccggaatataaggccaaccgaccaccaatgccggacgagctgcgttgccaaatagaacct
cttcatcaagttattaaagcaatggggcttcccttgattgctattgaaggtgttgaagcg
gacgatgtgattggtacgctggcctatcaagcttctcaacaagggatgccggtgctgatc
agtaccggtgataaagatatggctcagttggtggacgacaacattaccctaatcaacacc
atgaccaatgtggtgatggacagagaaggggtcattgagaaattcggtattccacctgaa
ctgatcatcgattatctcgcgttaatgggtgacaaggtcgataacattcctggcgtgcct
ggtgtgggtgataaaaccgccacagctctgctgcaaggtattggtggtcttagtcagttg
tacgaccatttggatgacattgcggcactaagcttccgcggctcaaaaaccatggcgaag
aagctggtggacaacaaagacaatgcgttgctgtcttatcagctagcgacgatcaagctt
gatgttgcattgcaagaaacgcctgaatcccttttaaaaacagagccaaataaagatgag
ctgatcaagctctatggtcaactggcctttaaatcttggctcaatgagctactcgaaggt
ggcactggtgttgttgaagcggatgaaaaagcacaaacatcggtacgcagtggcgcatct
ccggttgaaagtgaaatcaacaatgctgcggcgaatattgaccgtagccaatatcaaacc
atcttcgaccaagcgacattcgacatttggttggacaagctgaaagcgtcagagctgttt
gccttcgataccgaaacggacagccttgattacatggtcgctaacttagtgggcctgtca
tttgctgtggcagaaggtgaagccgcctatgtgcctgtcgcacacgattatctggatgct
ccggagcaacttgatcgcgattgggtgctggctcaacttaagccactgctggaagatgat
acgaaggcaaaagttggccaaaacttgaagtacgatgcctcagtgctggctcgctatggt
attgagatgaagggcatcaagcacgacaccatgctggcttcttatgtgtacaacagcgtg
ggcggcaagcacgacatggatagcttggcactgcgcttcctacagcacagttgtatttcg
tttgagcaattggctggcaaaggcaagaatcagctgactttcaatcaaattgatctgaat
gaagctgcggtttatgccgccgaagacgcagatgtcaccttgcgcttgcacaaccgcttg
tttgccaatattgaacaagatgagaaactcaacgccatctatcaagagattgaagtgcca
ttagtgccggtgttatcacgtatggaacggactggtgtgttgattgatgacatgaaactg
tctgcgcaatctcaagagatcgccgtgcgcttgggagagttagagcaaaaagcgtatgaa
atcgcaggccagccattcaatatgaactcgccaaagcagctgcaaaccatcttgtttgag
caaatgggtttacctgttatcaagaaaacgccttcaggtaccccttccacagcagaagaa
gtgttgcaagaactcgcgttggattacccactgccgagcgtcattatggagtaccgtggc
ttagcgaagttgaaatccacttacaccgataagctgccgaaaatgattaacccacacaca
gggcgcgtgcatacgtcttaccatcaagccgtgacggctactggtcgtttatcgtcaacc
gatccaaacttgcaaaatattcccattcgtaatgaagaaggacgccgtattcgccaggca
tttgttgcgccacatggctataaaattcttgcggtcgactattcacagattgaattgcgt
attatggcgcacttgtctggtgaccaagcactgcttgacgccttccaacaaggtaaagat
atccacgcggcaaccgcagcagaaatcatgggcgtgtcgattgaacaagtctccagtgag
cagcgtcgtcgagccaaagccgttaactttggtcttatctatggcatgagtgcgtttggt
ttagcgaaacagcttggaattccgcgtggtgaagcacaaacttatatggataaatatttc
gagcgctaccctggtgtcatgcagtacatggaagacactcgctcaaatgcctctcaacat
ggttatgttgaaaccatttttggtcgtcgtttgcatctaccggaaattacctctcgcaat
gtgatgcgtcgtaaagcagcagaacgtgcggcgatcaacgctccaatgcaggggactgca
gcagacatcatcaagaaagcgatgttgttggtggatcagtggattcaagaggaaggcaat
ggtcgagtcaaattactgatgcaagtacacgatgaactggtgtttgaagtggaagagtcc
tgtttgaccgaaattgaaagtaaagtacaacaattgatggaatctgcagcacagttaaat
gttcctttggtggcggaagctggccatggtgacaactgggatcaagcgcattaa
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