Williamsia herbipolensis: OG579_01615
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Entry
OG579_01615 CDS
T09708
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
whr
Williamsia herbipolensis
Pathway
whr00750
Vitamin B6 metabolism
whr01100
Metabolic pathways
whr01240
Biosynthesis of cofactors
Module
whr_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
OG579_01615 (pdxS)
Enzymes [BR:
whr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
OG579_01615 (pdxS)
BRITE hierarchy
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
Glu_synthase
NMO
Motif
Other DBs
NCBI-ProteinID:
WUM20567
LinkDB
All DBs
Position
355150..356073
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AA seq
307 aa
AA seq
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MTVTSEATTEHDQPTGAGTARVKRGMAEMLKGGVIMDVVNAEQAKIAEDAGAVAVMALER
VPADIRAEGGVSRMSDPDMIDGIIAAVSIPVMAKARIGHFVEAQILQSLGVDYIDESEVL
TPADYTHHIDKWRFTVPFVCGATNLGEALRRISEGAAMIRSKGEAGTGDVSNATTHMRTI
GGEIRRLTALSADELYVAAKELQAPYDLVVEVARLGRLPVTLFTAGGIATPADAAMMMQL
GADGVFVGSGIFKSGNPAERASAIVQATTFHDDADVLAKISRGLGEAMVGINVEQLPVGH
RLAERGW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgaccagcgaggcaaccaccgagcacgatcagccgaccggtgccgggacggcg
cgcgtcaagcgcggtatggccgagatgctcaagggcggcgtcatcatggacgtcgtcaac
gccgaacaggcgaagatcgccgaggacgccggtgcggtcgcggtcatggccctcgagcgc
gttcccgccgacatccgtgccgaaggtggcgtgtcgcggatgagcgatcccgacatgatc
gacggcatcatcgccgcggtgtcgatcccggtgatggccaaggcccgcatcggtcacttc
gtcgaggcccagatcctgcagagcctcggtgtcgactacatcgacgagtcggaggtcctc
acccccgccgactacacccaccacatcgacaagtggcgcttcaccgtgcccttcgtgtgc
ggtgcgaccaacctcggtgaggcgctccggcgtatctccgagggagcggccatgatccgt
tccaagggcgaggccggcaccggcgacgtctccaacgccaccacgcacatgcgcaccatc
ggcggcgagatccgtcgcctcaccgcgctgtcggccgacgagctctatgtcgcggcgaag
gagctgcaggcgccctatgacctcgtggtcgaggtggcccgtctcggacgcctcccggtc
accctgttcaccgccggcggcatcgcgaccccggccgacgcggcgatgatgatgcagctc
ggcgcagacggcgtgttcgtcggttcgggcatcttcaagtccgggaacccggccgagcgt
gcgtcggcgatcgtgcaggccaccaccttccacgacgacgcggacgtgctggcgaagatc
tcgcgcggtctgggggaggcgatggtcggcatcaacgtcgagcagctccccgtcgggcac
cggctcgccgagcggggctggtag
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