Wallemia ichthyophaga: J056_000313
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Entry
J056_000313 CDS
T03457
Name
(RefSeq) Leptomycin B resistance protein pmd1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
J056_000313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
wic02000
]
J056_000313
04147 Exosome [BR:
wic04147
]
J056_000313
04090 CD molecules [BR:
wic04090
]
J056_000313
Enzymes [BR:
wic01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
J056_000313
Transporters [BR:
wic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
J056_000313
Exosome [BR:
wic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
J056_000313
CD molecules [BR:
wic04090
]
Proteins
J056_000313
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA
AAA_15
AAA_21
RsgA_GTPase
Zeta_toxin
AAA_5
Rad17
AAA_16
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
20373265
NCBI-ProteinID:
XP_009265986
UniProt:
R9ARY2
LinkDB
All DBs
Position
Unknown
AA seq
1309 aa
AA seq
DB search
MASVVPQSGTEKAVLDANTEPGNATESSKPENTDDDIIISQDCNAPTGVSILQLWKYSTK
LEAFLIIIGLISAAGAGAIQPSLAIMFGNLVDVMNDFYSYVPTYQSDPTNPVLRLEFESR
KTTFKDGVDYNCLMLLVITICMFIAVYGFFYISQYTSETISRRLRLLYLRSVLRQDIAFF
DRIGAGEIATRIETDMALIQSAISEKSNLAVMFLSSFVVAFIIAFSIQARLAGILFIVVP
CIAIAMVVIIIFITKYEEKGLQNIADSGTLAEEVISTIRTAKAFSIQTALGLLYDDHLKA
ARREGFKLATVTAVGFSSFDFMAYSAYALAFVVFAHLLLNGTSVGQLISVVEAIIVGAFG
LGMVAPQLQIIAKGQAAAAKIYETIDRVPSIDSESEDGIKPASVNGSITFHHINFAYPSR
PGVQVMKDFNATFPPGQFTALVGASGSGKSTSVNLIERFYDPLSGTVKLDGHDLKDLNVK
WLRSKIGLVGQEPVLFNDTVRANVEHGLIGTDMEYFSDQQRLELVVRACQTANADNFIQT
LPSKYNNTVGERGMLLSGGQKQRLAIARAIVSNPPILLLDEATAALDSASESIVQKALDQ
ASQNRTTVAIAHRLSTIKNAHQIIVMGSGKILEVGNHYSLTSNPQSAYLQLVNAQQLAES
TEDSEAGVAEHVEVPTKDENRSVKSKQLSIASEILRDGESVPEKVINKYSWTHVLSSLVK
INRSAWPLYVIGTSAAICSGAAFPCFGIIFGKTLQEISERTPGDPDYQSYIKSHLDRDAL
WFFVIALGAGVALVIQTYCMQRSGEMLTFILRHESFKKLLHIDVDYFDRKENNTGVLCSG
LASNAKSVNGLAGISSGSILQCLATVIIGAAVGIGYSYKIGLVGVACLPLTFAAGLTELK
IVTLKDKHSRESYEESSNMACESAGAIRTVAALTREDQIVSHYGNLLLKPYNTAIRSALW
RSAVFALGQALSYGSIALIFYCGSLWLMDLTLDLQSFYVSLESIIFAAILSSRIFTYVPD
LSSARGGATRILRLLKHQDKIEIDSANYSGKHLDTVEGHVTFDDVHFRYPTRPDVPVLRS
LDLDIKPGSYVALVGPSGCGKSTTIQLIERFYDPTYGSVKLDGLELRDINLNNLRSHMAL
VSQEPTLYGGTVKYNIAMGATKPHEEVTQEELKEACADANILDFVQGLPDGFETQVGGKG
TQLSGGQKQRIAIARALIRKPKILLLDEATSALDQNSEAVVQAALDKVASGRTTIAIAHR
LSTIQKADRIYVFKDGMVSQAGTHKELIEERGGLYAELVALQTLSKRSE
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgttgtacctcaaagcggtacagagaaggcagttttagatgccaacacggag
cccggcaacgccacagaatctagcaaaccggagaatactgatgatgatatcattatatca
caggactgcaacgctccgactggcgtctccattttacagctctggaaatactcgacaaaa
ctcgaggcttttcttatcataattgggttgatcagcgctgctggtgccggcgccatccag
ccatccctcgcgatcatgtttggaaatttagtggatgttatgaacgacttttattcttac
gtgccaacgtatcagtcagatcccacgaaccccgtccttagattggagtttgagagtaga
aaaactaccttcaaggatggcgtggactacaactgcttaatgcttctcgttatcactatc
tgcatgtttatagccgtctatggcttcttttacatcagccagtatacttctgaaaccatc
tctcgtcgacttcgcctcttatatcttcgctcagtcttgcgtcaggacattgctttcttc
gataggataggagccggcgagatagccaccaggattgagacggacatggccttgatccag
agcgccatttctgaaaaatcaaacttggcagttatgttcctgtctagtttcgtagtggct
ttcatcatagcattcagtatacaagcgcgtctggctggtatcttattcatcgtagtcccg
tgcattgcgattgctatggtggttattataattttcattacaaagtatgaagagaaaggt
ctccagaacatcgctgattcaggtacactagccgaggaagttatttctacaatacgcaca
gcgaaggctttcagtatacagactgcattgggtttattgtatgatgatcatctcaaggca
gctcgcagagaagggttcaagctggccaccgtcacggctgttggattctcgtccttcgat
ttcatggcttactcagcatatgctctggcttttgtggtattcgcgcatttacttctgaat
ggcacgtccgtcggccaattgatatcagtagttgaggcaatcatagttggtgcgtttgga
ctaggcatggttgccccacaattacagatcatcgctaaaggacaagctgccgcggccaag
atctacgaaacgattgatagggtgccgtcgatcgacagtgaatcggaagatggcatcaaa
cctgcgtctgtgaacggaagtattacatttcaccatattaatttcgcgtatccttcacga
ccaggtgtacaagtgatgaaggattttaacgctacttttcctccgggacagtttacagca
cttgttggtgcgtctggaagtggaaaaagtacatcagtaaacctcattgagcgcttctac
gatcccctttccggcaccgtcaagctcgatggtcacgatttaaaggacctcaatgtcaag
tggcttcgcagcaagatcggtctggttggccaggagcctgttcttttcaacgataccgta
cgcgctaatgttgaacatggcctgatcggtacagatatggagtacttctcggatcaacag
cgactggaattggttgttagagcctgtcaaacagctaatgcagacaactttattcaaact
ctaccctccaagtacaataacacggtcggtgagcgcggtatgctcttgtcgggaggacaa
aagcagcgacttgccattgctcgtgctatcgtatcaaatccccctattctactgctggat
gaggctactgctgctcttgattcggcttctgaatccatcgtccaaaaggcactcgatcag
gcttcccagaaccgtacgacggtggccattgcacaccgtctctcgactatcaagaatgcg
catcagattatcgtgatgggtagtggcaaaatcctggaagttggcaatcactattccctc
acttctaatccgcaaagtgcatacctgcagcttgtcaacgctcagcaactcgcagagagc
actgaggatagtgaagcaggggtagctgagcatgtagaggtgcctacaaaagatgaaaat
aggagtgttaaatccaaacaactttcgatcgcctcggaaattttacgcgatggcgaaagc
gtccctgagaaggtaatcaataagtactcatggacgcacgtcctcagttcccttgttaag
ataaatcggagtgcttggccgctatatgtgattggcacatcagctgcgatctgcagtggc
gctgcctttccttgcttcggtataatatttggtaaaaccctacaagagattagtgaaaga
acacctggcgacccggactatcaatcctacatcaagtcccatttagatcgtgatgctcta
tggttctttgtcatcgctctgggtgctggtgttgctctcgtaattcagacttactgcatg
caaaggtccggagaaatgctcactttcatcctgcgacatgagtcgttcaagaagcttctg
cacatcgatgttgattattttgatcgtaaagaaaataacacgggtgtgttgtgttctggt
ttagcaagtaacgctaagtcagtgaatggtttggctggtatttcaagtggtagtattctt
caatgtctcgcaacagttataataggcgctgctgtcggcatcggttactcatacaaaatt
gggttggtgggcgtagcttgcctgcctctcacatttgccgccggtctcaccgagctgaaa
atagtcactctgaaagataagcattcaagagagagctacgaagagtcttcgaatatggct
tgcgagtctgctggtgcaataagaaccgtagccgcactcacaagagaggatcagattgtg
agccactacggtaatctcctcctcaagccatacaatacggcaataagatctgcgctatgg
agaagcgccgtttttgcacttggacaggcattgagttacggttctatcgcacttatcttc
tattgcggctcgctttggcttatggacctcactcttgatcttcaatcattttacgtaagt
ctggaaagtataattttcgcagccattttgtcttcacgtatattcacgtacgtaccggat
ttaagtagtgctagaggaggtgcgactcgcattctgaggctgttgaaacatcaagacaag
atagaaattgatagtgccaattatagcggcaagcacctcgatactgttgaaggtcacgtc
acatttgatgatgtgcatttcaggtatccaactcgcccagatgtaccggtcttacgttca
ctcgatctggacatcaagccgggcagttatgtggcattggtggggcctagtggatgtgga
aagagtactaccatacagctcatcgagcgcttttacgatccaacatacggctctgtcaag
ctagatggactagaattgcgcgacatcaatctcaacaatctcagatctcacatggcactc
gtctctcaggagcctacgctctacggaggcactgtcaaatacaatattgcaatgggagca
accaaaccacatgaggaggtcacacaagaggagctgaaagaagcctgtgcagatgccaac
attctcgactttgtacaaggtttgccggatggattcgagacgcaggtcggtggtaaaggt
acgcaactatcgggaggtcaaaagcagcgtatcgctatcgccagagctctcatacgaaaa
ccaaagatcctcctgctcgacgaggctacgagtgcactcgaccagaatagtgaggcggtt
gtacaggccgcgttggataaggtggcgtcgggtaggactacgatagctatcgctcatcgt
ctctcaactatccagaaggcggataggatatacgtcttcaaggatgggatggtcagtcaa
gctggaacccataaggagctgatcgaggagaggggtggactttatgcagagctcgtcgct
cttcaaacgctttccaagcgtagtgagtaa
DBGET
integrated database retrieval system
