Wallemia ichthyophaga: J056_001043
Help
Entry
J056_001043 CDS
T03457
Name
(RefSeq) DNA-directed RNA polymerase III subunit rpc1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
wic
Wallemia ichthyophaga
Pathway
wic03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J056_001043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_001043
Enzymes [BR:
wic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J056_001043
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
J056_001043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
20373995
NCBI-ProteinID:
XP_009268946
UniProt:
R9ADA8
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MKDIVAQDAPKRIKHIQFSTLSPQELVKISETEVTHNGLYSQTPDRAPQRNGVLDRRFGT
SDKSGSCDTCGESMAECVGHYGYIKLALPVFHIGYFRDIIAILQDICKNCARVLLTEDQR
RSYLKKFRRPNMENLQRQTTCKAVNTACRKQLYCPYCQSTNGVVKKTGLLKIVHEKFRAK
KTHVEHEEFVNTFNTAVSLSKEIAPHINKAQDDLNPLRVLDLFTRISNEDCELLGMNPKE
ARPEQYVWQYMHVPPVCIRPSVAQDGATNEDDITVKLGEIVQTSQIIKIGMGGGKSTTSQ
LMEQWELLQLACAMYINAEMPGVPSDKATKPIRGFVQRLKGKQGRFRGNLSGKRVDFSGR
TVIGPDPNLSVNEVAVPQRIAKVLTYPERVFEHNIEPLREAIRNGPDEHPGANYVQNGGV
NGFKRFLKFGNREEIAKRLRIGDIVERHLRDGDLILFNRQPSLHRLSIMCHYVKVRPWRT
LRLNECACNPYNADFDGDEMNMHVPQTEEARTEAQELMGVKHNMVTPRNGEPIIAAIQDF
ITAAYLLSKKDHFLDRQEFSQVISYLDHANMQIDLPPPVILKPRRLWTGKQILSILMRPN
KSSPVLVNLEAKNRTNHPPPKGMLPDMSSNDGFLVIRNSEIMCGHFDKATVGDGKKNSVF
GVILRDYGPDEAVNAMNRLARVCARWLANVGFSLGISDVMPSMDLRQRKESLVEEAYATC
NDLIEKAKYGKLENQPGCDQEQTLEALISGILSKVRDVVGASCMEELSRYNAPLIMATCG
SKGSVINVSQMVACVGQQIISGKRVPNGFQDRSLPHFPKKAKDPPSKGFVRNSFYSGLSP
PEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLSAHYDRSVRTSSGIVVQFLYGS
DGLDPVSLEGDGQPVEFLRSWKHTKAILDSTKHDRGMLPFEITEHVDKELRTKRWMKECT
PHYLSTVRNFIFSSITKKLADLRDAHGMFDALTRSDEWDEETDLDMGASEFEKAIVDNKA
KVAPAQLQEFLNICWQKYVKSKVEPGTTVGPIGAQSIGEPGTQMTLKTFHFAGVASMNVT
LGVPRIKEIINAAKAISTPIISTKLYDDQTESAARIVKGRLEKTFLGDIASHIEESYRGD
YNAVSVFVDMDAINKLQLELKLSDITYAIAKDKKIKVKKDDIKENHSKNRLRIYIQPGPD
SFHITRHLRRNLEKVVVTGIPEITRAIININEKENKRKELLVEGYGLLDVMTTEGIVGTR
TSSNHIMEVQKVLGIEAARSAIVNEIDNVMSSHGMGIDNRHIQLLSDSMTFKGEVLGITR
FGIAKMKDSVLMLASFEKTTDHLFNAAFHAKRDSVEGVSESIIMGNPAENCGTSMPSLIL
PKPKLPPSRKLIFESALKSSKHSTATVF
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatatcgtagcgcaggatgccccaaagaggatcaagcacattcagttctccaca
ctatcccctcaagaactcgttaaaatatctgaaactgaagttacccacaacggcctctac
agccagacgcccgacagggctccacagaggaacggtgtactcgatcgccgtttcggtact
tccgataagagcggcagctgcgatacttgcggggagtccatggctgagtgcgttggtcac
tacggttacatcaagctagctttgcctgtattccatattggttatttcagggatattata
gccattcttcaggatatttgcaagaattgtgctcgtgttcttctcactgaggatcagcgt
agatcttacctcaagaaattcagaagacctaacatggaaaatctacagcgccaaaccacc
tgtaaagctgtcaacactgcttgccgcaagcagctttactgcccttattgtcaatcaacc
aacggtgtcgtcaagaaaacgggtttactcaagattgttcatgagaaattcagagctaaa
aagacccatgtcgagcatgaagagtttgttaacaccttcaacaccgccgtcagtctcagt
aaagaaatcgctcctcatatcaacaaagctcaggatgacttgaatcctctcagagtgctc
gatctctttactcgcatttcaaacgaagactgtgagcttctaggaatgaaccccaaagaa
gccagacctgaacagtacgtttggcagtacatgcatgtcccccctgtctgtatcagaccc
tctgtcgctcaagacggcgccacaaacgaagatgatatcaccgtaaagctcggtgaaatc
gtacaaacgtcgcaaattattaagattggtatgggtggcggtaaatctacaacatctcag
cttatggagcaatgggaattgcttcaattagcttgtgcaatgtacattaatgctgaaatg
ccaggtgtccctagcgataaagctaccaagcctatcagaggttttgtgcagcgtctaaag
ggtaagcaaggtcgttttagaggtaatttgtccggtaaacgtgtcgatttttctggtcgt
actgtcattggtccagatccaaatcttagtgtcaatgaggttgctgttccacaacgtatc
gcaaaggttctcacatacccagaacgtgtctttgaacacaacatcgagcctttgagggaa
gctattagaaatggtcctgatgagcatccgggtgccaattacgtacaaaatggaggtgtc
aatggcttcaaacgtttcttgaagtttggtaatagagaagagattgccaagagattgcgc
atcggtgatatagttgaaagacacttacgcgatggtgatttaattcttttcaaccgtcaa
ccaagtttgcatagactttccatcatgtgtcactacgtcaaggttagaccttggagaact
ttgcgtctcaacgagtgtgcatgtaacccttacaacgctgatttcgatggtgatgaaatg
aacatgcacgttccacagactgaagaagctagaactgaagcacaagagttgatgggtgtc
aagcacaatatggtcacaccgcgtaatggtgagcctatcattgctgccatacaagatttt
attactgctgcatatcttttgtcaaaaaaagaccacttcttggatagacaggagttttct
caggtcatttcctatctcgatcacgcaaacatgcaaattgatcttccaccacctgtaatt
ctcaaaccaaggaggctgtggacaggcaagcaaattctcagtatactcatgcgtccaaac
aaatcaagtccagtcttggtcaaccttgaagctaaaaatcgtacaaatcacccaccacca
aaaggaatgcttccagacatgtcttctaatgacgggtttctcgttattcgtaactcagaa
ataatgtgcggacatttcgacaaggctactgttggtgatggtaagaagaactctgtgttt
ggtgtcattctgcgtgattacggtcctgatgaggccgttaatgctatgaacagacttgca
cgtgtttgtgcacgttggctggcaaatgtcggtttctcgcttggtataagtgacgtcatg
cctagtatggatctgcgtcagcgcaaggagtctctcgttgaagaagcttacgccacatgt
aacgacctcattgagaaggccaagtatggtaagcttgaaaaccaacctggttgtgatcaa
gaacaaacactcgaagcgcttatctctggtatattgtccaaggttcgtgatgttgtcggt
gcaagttgtatggaggagttaagtaggtataatgctccattgataatggctacatgtggt
tcaaaaggttctgtaattaacgtatctcaaatggttgcttgtgtcggtcaacagattatc
tctggtaaacgtgttccaaatggtttccaagatagatcattaccacatttccctaagaaa
gcaaaagatccgccatccaaaggtttcgtccgcaacagtttctattcaggtttgtcacca
ccagagttccttttccacgccatctctggtcgtgaaggtttggtcgatactgctgtcaag
actgctgaaactggttacatgcaaagaagattgatgaaggctctcgaggatttgtcagct
cactatgacagatcagttcgtacatcaagcggtatagtcgttcaattcctatacggttct
gatggtctggacccagtgtctttagaaggtgatggtcaacctgttgaattcttgcgtagt
tggaaacacactaaggctattcttgactctactaaacatgaccgtggtatgctaccgttc
gagatcactgagcatgtcgataaggagttacgaacaaagagatggatgaaagaatgtact
cctcattatctctctactgttcgcaactttatcttctctagtattacaaagaagcttgcc
gatttgagagacgctcatggcatgtttgacgcactgacaagatcggatgagtgggatgaa
gagacagatctcgatatgggagcatcagaatttgaaaaggcgatagtcgacaacaaagcc
aaggtcgcaccagcacagcttcaagaatttttgaatatctgttggcagaaatatgtcaag
tccaaggtcgaacctggtacgactgtcggtccaattggtgctcaatctattggtgagcct
ggtacacaaatgactttgaaaacattccactttgctggtgtcgcttctatgaacgtaaca
cttggtgtaccacgtattaaggaaattattaacgctgccaaggcgattagtacacccatt
atatcaaccaaactttacgacgatcaaactgaatctgctgcccgtattgtcaagggtaga
ttggagaaaacgtttttgggtgacattgcatcacacattgaagaatcatacagaggtgat
tacaatgcagtgtctgtatttgttgatatggatgcaatcaacaagctgcaattggagctt
aagctgtctgatataacttacgctattgccaaagacaaaaagataaaagttaagaaggat
gatatcaaggagaatcatagtaagaacagattgaggatctacattcagccaggtccggac
tcgttccacatcacccgacacctcagacgtaacttggagaaggttgttgttacgggtata
ccggaaataacgagagcaattatcaatatcaacgagaaggaaaacaagcgcaaagagttg
cttgtagaaggatatggattgcttgacgttatgaccactgagggaattgtcggtacacgt
acatcatcgaatcatattatggaggttcagaaggtgttgggtatcgaagcagcaagaagt
gcgattgttaatgaaatagataacgtcatgtcatctcacggtatgggtatcgataatcgt
cacattcaactgctatccgatagtatgacatttaagggagaagtattgggaattactcga
tttggtattgcgaagatgaaggattcagttttgatgttggcatcatttgaaaagacaact
gaccacttgttcaatgctgcgttccacgccaaacgagattcagttgaaggtgtatctgag
tctattatcatgggtaacccagcagagaattgtggtacatctatgccttcattgattcta
ccaaaaccaaaactgccaccatcacgtaaattgatatttgaatctgcgcttaagtcgtcg
aagcattcaacagcaactgtattttaa
DBGET
integrated database retrieval system
