Wallemia mellicola: WALSEDRAFT_60553
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Entry
WALSEDRAFT_60553 CDS
T03142
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
wse
Wallemia mellicola
Pathway
wse03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WALSEDRAFT_60553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wse03021
]
WALSEDRAFT_60553
Enzymes [BR:
wse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WALSEDRAFT_60553
Transcription machinery [BR:
wse03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
WALSEDRAFT_60553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
NRDD
Lac_bphage_repr
Motif
Other DBs
NCBI-GeneID:
18474024
NCBI-ProteinID:
XP_006958721
JGI:
Walse1_60553
UniProt:
I4YBN3
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MLEDEDVDVKPKITESDDWTTPGNFHGKSLTDEVKTVEDKWQLLPAFLKTRGLVKQHIDS
YNHFVDVELKNIIKANEKVTSDVDPKFYLKYTDIHVGNPERQDADSVDKSITPHEARLRD
MTYSAPIRISVEYTRGKQIVRRRGIPIGRLPVMLRSNKCILSGKDEETLARYRECPLDPG
GYFVVKGTEKVILVQEQLSKNRMIIETDPKKNVQASVTSSTHERKSKSYVATKNGKIYLR
HNSIGDDVPIVVALKAMGVTSDKEILQLVAGHDDEYKEVFYINIEEALRMGIHTEMQALE
WIGARSKSARRAVGPAHQKRPVWEDAIETLSTIVLAHVPVENLNFRPKAIYVAVMVRRVL
MAMVDEKMLDDRDYVGNKRLELAGQLLSLLFEDLFKKFNHDLKLNIDKVLKKPNRTTEFD
AYTQLLYGGDHITSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQF
EKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVEEEPIVNICYMLG
VEDVCLLTGTELYRRDTYIVSLNGNLIGVTRHPLKFVTQFRKLRRNGFINEFVSVYINHH
HNSVNISSDGGRICRPMIIVENSFSKVTSEHIKMLKAGKIDFDAFLTQGLVEYLDVNEEN
DAYIAISENDITETSTHLEIEPFTLLGACAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAY
NQLNRIDTLLYLMVYPQQPMVKTKTIELIGYDKLPAGQNAMVAVMSYSGYDIEDALILNK
ASLDRGFGRCQVMRKYSTMIRKYPNGTHDRLADAPIGLDGVIPKKYQALEPDGIAGAGER
VDTNDVIVNKQSPSNALDNSINPGQADSSTYKNAPMSYKSPVPGFVDQVLITDTESEQTL
VKALLRQTRRPELGDKFSSRHGQKGVCGLIVPQADMPFNDRGITPDVIMNPHGFPSRMTV
GKMIELLSGKAGVIRGTLEYGTAFGGSKVDDMSQVLIDNGYSYAGKETMTSGITGECHTF
YTYLGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDALLGYGA
AHLVRERLMLSSDLFHVDVCNDCGTMGYNTFCPMCKSQKNISNIQIPYAAKLLFQELLAM
NIYPKISLEDAV
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggatgaggacgttgatgtcaagccaaaaatcacagaatctgatgattggacg
actcctgggaactttcacggtaaatcgctcacagatgaggtaaaaaccgtcgaagataaa
tggcaacttctaccagcatttttgaaaactagaggtcttgttaagcagcatatcgattcc
tacaaccactttgtagacgtagaattgaagaatattataaaagcaaatgaaaaagttaca
agcgatgtcgacccaaagttttaccttaaatatacagatatccacgtaggcaacccagag
agacaggatgcagactcagtagataaatcaattacccctcatgaagccagattgagagat
atgacctacagtgcaccaatcaggatcagcgtcgaatacaccagaggtaaacaaatcgtt
agaaggagaggtattcctattggtagattacctgttatgttgaggagcaataaatgtata
ttgtcaggaaaggatgaagagactttagcacgctatcgagagtgtccgcttgatccaggt
ggttattttgttgttaaaggtacagaaaaggtcatcctcgtacaagaacaactttcaaag
aaccgtatgattatcgaaactgatccaaaaaagaatgtccaagcttccgtcaccagttct
acccatgaacgtaaatctaagtcatacgtcgcaacaaagaacggaaagatttatcttcgt
cataactccattggtgatgatgtccctattgtagtcgctcttaaggctatgggtgtcaca
tctgataaagaaattttgcaattggttgcaggacacgatgatgagtacaaggaagttttc
tacattaacattgaagaggcgcttagaatgggtattcacactgaaatgcaggcgcttgag
tggattggcgctagaagtaaatcagctagacgtgcagttggaccagctcatcaaaagcgc
ccagtttgggaagatgctatcgagacactcagtactatcgtcttggcacatgttcctgta
gagaaccttaatttccgtccaaaagctatctacgttgcagtcatggttagaagagtactt
atggctatggtcgacgaaaagatgcttgacgatcgtgattatgttggtaacaagcgtcta
gagttagctggacagctcctttcacttttgttcgaagatttattcaagaagtttaatcac
gatctcaaactcaacatcgacaaggtgctcaagaaaccaaatcgtacgactgaatttgat
gcttatacgcagcttctttatggtggcgatcacatcacatctggtttcgttagagcaata
tcaacgggtaattggtctctgaagcgtttcaagatggaaagagcaggtgttacgcatgtc
ctcagtagattaagttatatttcagctcttggtatgatgactagaatttcttctcaattc
gaaaagacgagaaaggtttctggtcctcgtgcacttcaaccatctcaatggggtatgctt
tgtccgtccgatacaccagagggtgaggcttgtggtttggtcaaaaacttggcgcttatg
acccacattactactgatgttgaggaagaaccaattgtcaatatttgttacatgcttggt
gtcgaagatgtttgtttactcactggtacggagttatatagacgggatacctacattgta
tctcttaatggtaacctcatcggtgtcaccagacatccactcaagtttgttactcaattt
agaaagcttcgtcgcaacggatttatcaatgaattcgtttctgtctacatcaatcaccat
cacaattctgtcaatatttcttcagatggtggtcgtatctgtagaccaatgattattgtc
gaaaattcattctcaaaggtcaccagtgaacacataaaaatgctcaaagcaggtaagatt
gatttcgatgcctttttgacacaaggtttggttgagtaccttgatgtaaacgaagaaaat
gatgcatacatcgctatcagcgaaaatgacataacggagacatctacacatttggaaatt
gaaccattcacacttctcggtgcttgcgctggacttattccttaccctcaccacaatcaa
tcacctagaaacacttaccaatgcgcgatgggtaaacaagctataggcgcaattgcttac
aaccaacttaaccgtattgatacattgctttacttgatggtttatcctcaacaaccaatg
gttaagactaagacaattgaattgattggatatgacaaattaccagcaggacaaaatgct
atggttgctgtcatgtcttactcaggttatgatattgaggatgctttgattttgaacaag
gcatctctcgatcgtggctttggtcgttgtcaagttatgagaaagtattctacgatgatc
cgtaaatatccaaatggtacacacgatcgtctcgcagatgcaccaattggattggatgga
gtgataccaaagaagtatcaggcgcttgaaccagatggtattgctggtgctggtgaacgt
gtagacacaaacgatgttatcgtcaacaagcaatcaccttccaacgctctcgataattcc
atcaatccaggtcaagcagattcatcaacttataagaatgcaccaatgtcttataaatca
cctgtaccaggttttgtcgatcaggtcttgatcactgacacagaaagtgaacaaaccctc
gtcaaagccttacttcgtcaaactcgtcgtccagaattaggtgataaattctcatcccgt
cacggtcaaaaaggtgtttgtggtttaattgtacctcaagcagatatgcctttcaacgat
cgtggtataacaccagatgttattatgaatcctcatggtttcccatctcgtatgacagtc
ggtaaaatgattgaattgttgtctggtaaagctggtgttataagaggtacacttgaatat
ggtacagcatttggtggatcgaaagtagatgatatgtcacaggtacttatagataatggt
tattcatacgctggtaaagaaaccatgacgagtggtattactggtgaatgtcacactttc
tatacatatctcggcccaatttattatcaaaaattgaagcacatggttcttgacaagatg
cacgctagagctcgtggtccacgtgcagttctcactcgtcagcctacagaaggtcgttcc
agggatggtggtcttcgtcttggtgagatggagcgtgacgctttacttggttatggtgct
gctcatcttgtcagagaacgtctcatgttgtcatctgatttattccatgttgacgtttgc
aacgactgtggtacgatgggctacaataccttctgtccaatgtgtaagagtcagaaaaac
atttcaaacatccaaattccatatgccgccaaacttctcttccaggaactcctcgccatg
aacatatatccgaagatcagtcttgaggatgctgtttag
DBGET
integrated database retrieval system