Xylocopilactobacillus apicola: XA3_09570
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Entry
XA3_09570 CDS
T09717
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xap
Xylocopilactobacillus apicola
Pathway
xap03030
DNA replication
xap03410
Base excision repair
xap03420
Nucleotide excision repair
xap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XA3_09570
03410 Base excision repair
XA3_09570
03420 Nucleotide excision repair
XA3_09570
03440 Homologous recombination
XA3_09570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xap03032
]
XA3_09570
03400 DNA repair and recombination proteins [BR:
xap03400
]
XA3_09570
Enzymes [BR:
xap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XA3_09570
DNA replication proteins [BR:
xap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XA3_09570
DNA repair and recombination proteins [BR:
xap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XA3_09570
NER (nucleotide excision repair)
GGR (global genome repair) factors
XA3_09570
BRITE hierarchy
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BDR58516
LinkDB
All DBs
Position
971977..974601
Genome browser
AA seq
874 aa
AA seq
DB search
MDKEKLLLLDGNSLTYRSFFALNVNNFTSHEGIPTNAIYGLKRVLDSIVKDLKPTKMLAA
FDASDRTFRTELYSDYKGNRSKTPDELSAQFPYVHEMLKLMGITSYELQDYEADDIIGTL
AKKANEQGIEVVIVTGDRDLTQLINDHTTVYITQKGFSNYETYNPDHLKEKLGITPKQVI
DMKALTGDTSDNYPGVQGVGEKTALKLLGQYPNIEELYQHLGDLKPSKMKENLIRDQKQA
FQSKELATIRTDAPIQISIEDTEIKPSNIEGLNSFFEKLDMKSLIIKTSNDENLKEKDVP
AYQVLSLENISALKELKEPLIYFETFNSNYHEAEIKAMIIAERGKIFVTKDFSLLTSEIL
AGFEHIWTFDGKKTFILANRHQLSLPKISYDLMIASYVDDSGHSNESLATTIDDYFDEFI
LSDETVYGKGVKISLPENDQILYDHLAKKAEGYFLSKDIVDAHLKMHEQVELLKQIELPL
SMVLAKMELEGIKLNKSELKRMGKEFDSNIHELKSKIFAEVGQEFNLNSPQQLADILFNV
MKLPPSKKTKRGYSTSVEVLEELRPHSQVVDWILDYRQLSKLKSTYVDGLQKFDFGNGII
HTRFLQTMTSTGRLSSVDPNLQNIPARGMGKIIRKAFTARQNDWQLFSSDYSQIELRVLA
HISGDPHMIKAFEDDRDIHQATAEKIYHLEPGAEITPDMRRVAKATNFGIVYGISDYGLA
KNIGVTRKEAAAFINTYFEEYPLVKVFMDNSVKFAREEGYVETLSHRRRYLPDIHAKNFN
LRHFAERTAMNTPIQGSAADIIKIAMVSIQNYLADQNLKSRMILQVHDELTFEVAPGEEE
IIGSIVPKLMDSAIKLKVPLKVESHFGETWYDVH
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaaaaattattgttgcttgatggcaactcacttacttaccgttcattcttc
gcattgaacgtgaataattttactagtcatgaaggcattccaaccaatgcaatctatggc
ttgaaaagagttttggattcaatcgtaaaagatcttaagccgacaaaaatgttagccgct
tttgatgcttcggatcgaacttttcgaacagaactatattctgattacaaaggtaatcgc
tctaaaactcctgatgaactttcggcccaatttccttatgttcatgaaatgttgaaatta
atggggattacttcctatgaattacaagactatgaagctgatgatatcattggtacactt
gcgaaaaaggcaaatgaacaaggaattgaggttgtaattgtaacgggagatcgcgattta
actcaattaatcaatgatcacacaacagtttatatcactcaaaaaggttttagtaattat
gaaacttataaccctgatcaccttaaagaaaagttggggatcactccaaaacaggtgatt
gatatgaaagctttgactggagatacttctgataattatccaggagttcagggagttggt
gaaaaaactgctttaaaattgttgggacagtatcctaatattgaagaactttaccagcat
cttggtgacttaaagccaagtaaaatgaaggagaatttgattcgagatcaaaaacaggca
tttcaatctaaggaattagcaacgattagaacagatgcgccgattcaaatatccattgaa
gatactgagattaaaccatcaaacattgagggattgaatagcttttttgaaaagcttgat
atgaagtctttaattattaaaacatctaatgatgaaaatcttaaagaaaaagacgttcca
gcttatcaagttttaagtttggaaaatatctcggcccttaaagaattaaaggaaccgcta
atttattttgaaacttttaattctaattatcatgaggctgagattaaggcgatgattatt
gcggagcgagggaaaatttttgttactaaagatttttcgttgttaacctcggaaatatta
gctggctttgagcatatttggacttttgatggtaaaaaaacgtttattttggcgaatcga
caccagctttctttacctaaaataagctatgatttgatgattgcttcttatgttgatgat
tcaggccacagtaatgagagccttgcaactacgattgatgattactttgatgaatttatt
ttgtctgatgagacggtctatggcaagggcgttaaaatttctttgccagaaaatgatcaa
attctctatgatcatcttgctaaaaaggccgaaggatattttctgagtaaggatattgtt
gatgcacatttaaagatgcacgagcaagtcgaattactaaagcaaattgagttacctttg
tcaatggttttagctaaaatggaattagaagggatcaagctcaataaatctgagttaaaa
aggatgggtaaagaatttgattccaatattcatgaattgaagtctaaaatttttgctgaa
gtagggcaggaatttaatttaaattctcctcagcaattagccgatattctttttaacgtt
atgaaattaccaccttcaaagaaaacaaaacgaggttattcaacgtcagttgaggtttta
gaagaattaaggccgcactctcaggtcgttgattggattcttgattatcgtcaactttca
aaattaaaatccacctatgtcgatggtctgcagaaatttgatttcggtaatggaattatt
catactagatttttacaaacaatgacctcaaccggacgtttatcctcagttgaccctaat
ttgcaaaatattccagcacgaggaatgggaaaaattattcgtaaagcttttacagcccgt
caaaatgattggcagttgttctcatctgattattcgcaaattgaattacgggttttagct
catatttcaggtgatcctcatatgatcaaggcttttgaagatgatagagatatccaccag
gcaacagctgagaaaatttatcatttagagccaggagctgaaattacaccagacatgcga
agagttgcaaaagccactaattttggaatagtctacggaatttctgattatggtttagct
aaaaatattggagtaactagaaaagaggcagccgcattcattaatacttattttgaagaa
tatcccttagtcaaagtttttatggataattcggtgaaatttgctcgagaagaaggttat
gtagaaacattatctcatcgtcgtcgttacttaccagatattcatgctaaaaatttcaat
cttcgtcattttgctgaaagaactgcgatgaatactccaatccaaggctcagctgctgat
ataatcaaaattgcaatggttagtatccaaaactatcttgcagatcagaatttaaaatca
cggatgattttacaggtacatgatgaattaacatttgaagttgctccaggagaagaagaa
attattggatcaatcgtacctaaattaatggattcagctatcaaactaaaagttcccctg
aaagtagagagccactttggggaaacttggtacgacgttcactag
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