KEGG   Xenorhabdus bovienii SS-2004: XBJ1_1672
Entry
XBJ1_1672         CDS       T01186                                 
Symbol
ribD
Name
(GenBank) bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xbo  Xenorhabdus bovienii SS-2004
Pathway
xbo00740  Riboflavin metabolism
xbo01100  Metabolic pathways
xbo01110  Biosynthesis of secondary metabolites
xbo01240  Biosynthesis of cofactors
xbo02024  Quorum sensing
Module
xbo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xbo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    XBJ1_1672 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XBJ1_1672 (ribD)
Enzymes [BR:xbo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     XBJ1_1672 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     XBJ1_1672 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CBJ80798
UniProt: D3V0W6
LinkDB
Position
complement(1633762..1634871)
AA seq 369 aa
MTLDEKYMSRALELANQGRFTTSPNPNVGCVIVQGDHIVGEGFHVCAGEPHAEVHALRMA
GGKAKGATAYVTLEPCSHHGKTPPCADALIAAGISRVVAAMQDPNPQVAGRGLYKLQQAG
IAVEHGVLMAEAEALNKGFLKRMRTGFPYLQLKMGASLDGRTALASGESKWITSPEARQD
VQQFRAQCSAILSSSATVLADDPSLTVRWHELDAEIQAIYPQEQVRQPIRIIVDSQNRVT
PQHQVVQQVGQCWLARTHTDQQQWPDNVDHIVLPAHGGGVDLVLLMMQLGKRQINSVWAE
CGPVLAGALLSLGLVDELILYIAPKVLGNTARGLFAIPELQKLSDAPEFTLFDVRQIGSD
VRLRLRPAS
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgactctcgatgaaaaatatatgtcccgtgcgctggaactggcgaatcagggacgtttt
acgacatctccaaacccgaatgttggatgtgtcatcgttcagggcgatcacattgtcggt
gaaggtttccatgtatgtgccggtgaacctcatgcagaggtacatgctctccgcatggcc
ggaggcaaggcaaaaggggcaacggcttatgtcacccttgagccgtgtagtcaccacggc
aagacgcctccctgtgccgatgcgttgattgcagccggtatcagtcgtgttgtggccgct
atgcaagatcctaatccgcaggttgcagggcgtggtttgtataaattgcagcaggcgggg
attgccgttgagcatggcgtgttgatggcggaggcagaagcgctgaataagggatttctc
aagcgtatgcgcacgggattcccttatttgcaactgaaaatgggcgcgtcactggacgga
cgtactgcgctggcatcgggtgaaagcaagtggattacgtcgccagaagcccgtcaggat
gtgcagcagttccgggcgcaatgcagtgctattctcagttccagtgccacggtactggca
gatgatccttcattaactgtccgctggcatgaattggatgccgaaatacaggcgatttat
cctcaagagcaagtacgtcagccaatccggatcattgttgatagccagaatcgcgtaaca
ccacagcatcaagttgtacagcaggtggggcaatgttggttagcacgtactcacaccgat
cagcagcagtggcctgacaatgtcgatcatattgtattgcctgcccacggaggaggtgtt
gatctggttttgctgatgatgcagcttggtaaacgtcagataaattcggtttgggctgaa
tgtgggcctgttttggcgggagcattgttatcactggggctagtcgatgaattaatcctt
tatatagcaccaaaagtgctgggaaatactgcccgtgggctgtttgctatccctgagtta
caaaaattatcggatgcgcctgaattcacgctgtttgatgtccggcagattgggtctgat
gtgcgtcttcgcttgcggccagcgtcttga

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