Xenorhabdus bovienii SS-2004: XBJ1_2976
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Entry
XBJ1_2976 CDS
T01186
Name
(GenBank) putative peptidase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xbo03016
]
XBJ1_2976
Enzymes [BR:
xbo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
XBJ1_2976
Transfer RNA biogenesis [BR:
xbo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
XBJ1_2976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_3
Pyr_redox_2
NAD_binding_8
FAD_binding_2
FAD_oxidored
ThiI
GIDA
NAD_binding_7
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
CBJ82100
UniProt:
D3V8D8
LinkDB
All DBs
Position
2936766..2938817
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AA seq
683 aa
AA seq
DB search
MKKSAISSATLNWNEQGTPVSEQFDDVYFSNQDGLEETLYVFLKGNHFPQRFNTHSRPDC
IIAETGFGTGLNFLTLWRAFSTFRQQYPDTPLKRLHYISFEKYPLTTADLKTAHQRWPEL
QVFSEELCQQWPLPLAGCHRLMLNNGTVTLDLWFGDVNDLLPRINSNLTGKIDAWFLDGF
APSKNPQMWSEQLFTAMARFSRPEGTFATFTSAGIVRRGLQGAGFDVKKIKGFGHKREML
TGVLAPSAHFLFSSSDTPWFARQAATDTDDIAIIGGGIASVLTALALLRRGAKVTLYCQD
NQPAQNASGNQQGAIYPLLNGRDDLLERFFISAFTFARRQYDQLIDENVSFDYQWCGVSQ
LAYDEKSDKKIAKMLQTSWLEEIAIGMDRQKLSQASGLDVNYHGIHYPQGGWLSPAQLTQ
EAINLAERRGMLTYFNHKMTQLVQDEYGWQLHIEHQGQSLHKNHRVVIIANGHCLTQFAQ
TEKLPVTAVRGQVSHIPTTTRLSQLKNVLCYDGYLTPANPQNQHHCIGASYQRGNVDTQY
SPAEQQENRDRLLKSLPDVDWVKQVNISEAKSRQGIRCVIRDHMPMVGNVPIFSQIMVKY
AGLSQRINTDETIEESPYYPDLFVIGALGSRGLCSAPLSAELLAGQIFGEALPLDDETLA
ALHPNRFWVRKLLRGREVKAGKP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagagtgctatcagcagcgcaaccctaaactggaatgaacagggtacacctgtt
tctgagcagtttgatgatgtttatttttcaaatcaagatggcttggaagaaactttatat
gtttttttaaaaggtaatcattttccccaacgttttaatacgcactcccgccctgattgt
attattgctgaaactggattcggtactgggttgaatttcctgacactttggcgagctttt
tcaaccttcagacaacaatatcctgatacacctttaaaacggcttcattacatcagtttt
gaaaaatacccattaacgacagcggacttgaagactgcgcatcagcgctggccagaactt
caagtattttctgaagagttatgtcagcaatggcctttacctcttgcaggctgtcacagg
ctaatgctgaataatggcactgtcacactggatctctggtttggtgacgtaaatgatcta
ttaccgaggataaattcgaatttaactggaaaaattgatgcttggtttttagatggtttt
gcaccatccaaaaatccgcagatgtggagcgaacaactgttcactgcaatggcaagattt
tctcgtccagaaggaacatttgcaacatttacgtcagcgggaatcgttcgacgtggattg
cagggagccggatttgatgtcaaaaaaataaaaggctttggacataaaagagagatgctg
acaggggttctggctccatctgcacatttccttttttcctcatcagatactccatggttt
gcccgacaagcagctaccgataccgatgatatcgccatcattggtggcggcatcgccagt
gtattaactgcacttgcactattacgccggggcgcgaaagtgacactgtattgccaagat
aaccaacccgcacaaaatgcatcaggcaatcagcagggagccatttatccgttactgaat
ggccgtgacgacttactggaacgtttctttatctccgcctttacctttgcccgccgtcaa
tatgatcagctaattgatgaaaatgtttcctttgattatcaatggtgcggtgtcagccag
ttggcttacgatgaaaaaagtgacaaaaaaattgccaagatgctgcaaacatcgtggtta
gaagagattgcaattggaatggatcgccagaaattgagccaagcgagcggattagatgtt
aattatcatggtatccactatccacagggaggatggttatctccggctcaattgactcag
gaagccatcaatctggcagaacggcgtggaatgctcacctatttcaaccacaaaatgact
caattagttcaagatgaatacggttggcagttgcatattgagcaccaggggcaatcactg
cacaaaaaccacagggtcgttatcattgctaatggacactgcctgacgcaatttgcacaa
actgaaaaactgcccgttactgctgttcgtggacaagtcagccatatcccgaccactacc
cgtctcagtcaactgaaaaacgtactgtgttacgatggctatctgactcctgcgaatcct
caaaatcaacatcattgtatcggtgccagctatcagcgagggaacgttgatactcagtat
tctcccgcagaacagcaagaaaatcgtgatcgtttattaaaatctttacccgatgtcgat
tgggtgaaacaagtcaatatttcagaagcgaaatcccgtcaagggatacgatgtgttatt
cgggatcatatgccgatggtaggcaatgtacctattttcagtcaaattatggtcaaatat
gctggtttatctcaaaggataaacactgatgagacaattgaagaatctccttattatcct
gatttatttgttattggtgcattaggttcccgtggattatgttctgctccgttgagcgca
gaattactcgcagggcagatttttggggaagctctaccacttgatgatgaaacattggcg
gccttgcacccaaaccgattctgggtcagaaaattattacgaggcagggaagttaaagct
ggaaaaccttaa
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