Xenorhabdus bovienii SS-2004: XBJ1_4340
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Entry
XBJ1_4340 CDS
T01186
Symbol
rfaC
Name
(GenBank) ADP-heptose; LPS heptosyl transferase I
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00540
Lipopolysaccharide biosynthesis
xbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XBJ1_4340 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xbo01005
]
XBJ1_4340 (rfaC)
Enzymes [BR:
xbo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
XBJ1_4340 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
xbo01005
]
Core region
XBJ1_4340 (rfaC)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Epimerase_2
UPF0181
DUF4434
Motif
Other DBs
NCBI-ProteinID:
CBJ83443
UniProt:
D3V714
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All DBs
Position
4158252..4159217
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AA seq
321 aa
AA seq
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MRVLLVKTSSMGDVLHTLPALTDAKQHFPGIQFDWIVEEGFAQIPTWHNAVENVIPVAIR
RWRKNWFRKDIREERARFRETLRQNQYDTIIDAQGLLKSAFLVTRLAHGSKHGYDRKSIR
EPLASFFYDHRHTVSKQQHAVERIRTLFADSLGYQKPTEQGDYAIARHFLNSQIKGQSDY
LVFLHATTRDEKHWPENHWRQLIAEIQSTGMRIKLPWGAEHEHQRALRLAEGFAHVDILP
KLTLAEVAQVLAGAKAVVSVDTGLSHLTAALDRPNITLFGPTDPGLIGGYGKEQLPLKSV
DNTMQSIAPPKVMQLLQNVLK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttactggtaaaaacgtcttcaatgggtgatgtgctccataccctgcctgca
ttgacggatgcaaagcagcactttcccggtattcagtttgattggatagtggaagaagga
tttgcccagatcccgacatggcacaacgccgttgaaaatgtaattcccgttgctattcgc
cgctggcggaaaaattggtttagaaaagatattcgtgaagaacgggcacgcttccgggaa
acattacggcaaaaccaatatgacaccattattgatgcccaagggctgttaaaaagtgcc
tttttggtgacacgcttggcacatggctcaaaacacggctatgacagaaaaagtatccgc
gaaccactggccagctttttctacgatcaccgtcataccgtcagtaaacagcaacacgcg
gtagagcgtatccgtacattgtttgctgatagtctgggttatcaaaaacccacagaacaa
ggtgattatgctatcgcccgccactttctgaactcacagattaaaggtcaaagtgactat
ctggttttcctgcacgcgaccacccgtgatgaaaaacattggccagaaaaccactggcgg
caactgattgcagagatccagtcaacaggtatgcgaatcaaactgccttggggtgcagaa
catgaacaccaacgggcattgcggttagcagaaggctttgcccatgttgatatattgcca
aaattaacactggctgaagttgctcaggtattggccggcgcaaaagccgtggtttcggtt
gataccgggctgagtcacctcactgccgcccttgatcgcccgaatatcactctgtttggc
cccaccgatccgggtttaattggcggctatggaaaagaacagcttcccctgaaatcggtg
gataatacgatgcaaagcattgcaccaccgaaagtgatgcagctgttgcaaaacgtatta
aaataa
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