Xenorhabdus budapestensis: HGO23_02025
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Entry
HGO23_02025 CDS
T07176
Symbol
kdsD
Name
(GenBank) arabinose-5-phosphate isomerase KdsD
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu00540
Lipopolysaccharide biosynthesis
xbu01100
Metabolic pathways
xbu01250
Biosynthesis of nucleotide sugars
Module
xbu_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HGO23_02025 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xbu01005
]
HGO23_02025 (kdsD)
Enzymes [BR:
xbu01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
HGO23_02025 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
xbu01005
]
Lipid A
HGO23_02025 (kdsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
QTL40225
LinkDB
All DBs
Position
complement(484127..485095)
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AA seq
322 aa
AA seq
DB search
MPKIDFQQAGKRVLHIELDGLARLEQYINDDFSKACELMFGCEGKVIVMGMGKSGHIGRK
MAATFASTGTPSFFVHPGEASHGDLGMVTPKDIVIAISNSGESNEILALIPILKRQKVPL
ICMTNNCNSSMGKASDVHLCIKTPQEACPLGLAPTTSTTATLVMGDALALALLEARGFTT
EDFALSHPGGALGRKLLLLTSDLMTTGDNIPRVPRTATLREALIEITRKKLGMTVICGGD
MQIDGIFTDGDLRRVFDMGIDLNNAKISDVMTTGGVRIKPNALAVDALNLMQSRHITSLL
VTEGNTLLGVLHMHDLLQAGVV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagattgattttcagcaagcaggtaagagagtattacatatcgaactcgacgga
ttagcgaggttggaacaatacatcaatgatgatttcagcaaagcctgtgaattaatgttt
ggctgcgagggcaaagtcattgtcatggggatgggaaaatccggccacataggaaggaaa
atggcagcaacatttgccagcaccggaactccgtcgttctttgtccacccgggagaagcc
agtcacggtgatctcggcatggtaaccccaaaagacattgtaatagccatttccaattcc
ggtgaatccaatgagatcctcgccttaattccaatacttaagcggcaaaaagtcccactc
atctgtatgacaaataactgtaacagtagtatgggtaaagcctctgatgtccatttgtgc
atcaaaacaccacaagaagcctgcccattgggattggctcccacaaccagcacaaccgca
acgttggtcatgggcgatgccctggcccttgcactactggaagcccgtggttttaccaca
gaagatttcgccctttcccatcccggtggtgcacttggacgcaaacttttgctactgacc
agtgacctaatgaccactggtgataatattcctcgagtaccccgcactgccaccctgcgt
gaagcattgatagaaatcacacgaaaaaaactgggcatgacggtcatctgtggtggtgat
atgcagatcgatggtatctttactgacggggatctacgccgcgttttcgatatgggtatc
gatttaaacaacgccaaaatttctgacgtcatgaccacgggaggggtccgcatcaaaccg
aatgcgttagctgttgatgccctgaatctgatgcaatcacgccatattacctccctactg
gttacagaaggcaacaccttgcttggtgtattacatatgcacgatctattgcaagcagga
gttgtataa
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