Xenorhabdus bovienii CS03: XBW1_4685
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Entry
XBW1_4685 CDS
T03845
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv00540
Lipopolysaccharide biosynthesis
xbv01100
Metabolic pathways
xbv01250
Biosynthesis of nucleotide sugars
Module
xbv_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
XBW1_4685 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xbv01005
]
XBW1_4685 (hldD)
Enzymes [BR:
xbv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
XBW1_4685 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
xbv01005
]
Core region
XBW1_4685 (hldD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CDM92028
UniProt:
A0A0B6XG78
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All DBs
Position
4549794..4550732
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AA seq
312 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDEGYKDILVVDNLKDGTKFVNLVDLDITDYMDKEDFIASI
VAGDDFGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHYCLERQIPFLYASSAATY
GGRSENFIEERQYEKPLNIYGYSKFLFDQYVRDILPQADSQICGFRYFNVYGPREGHKGS
MASVAYHLNNQIHQGQNPKLFAGSEHFRRDFISVGDVAAVNLWFWKNSVSGIFNCGTGRA
ESFQAVADAVTEFHTEKSPVVEYIEFPEKLKGRYQSFTQADLTKLRAAGYDKPFKTVAEG
VTEYMQWLNQDN
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcactggcggcgcagggtttatcggcagcaatatcgtcaaggcactgaat
gacgaaggctataaggatattttagttgttgataatctgaaagacggcacaaaattcgtc
aatctggttgatttggatatcaccgattatatggataaggaagatttcattgccagtatc
gttgcgggtgatgattttggcgatattgatgccattttccatgaaggtgcgtgctcatcc
acaacggaatgggatggcaagtatatgatggacaataattatcagtactccaaagatata
ttgcattactgtcttgagcgccagatcccttttctgtatgcctcttcggctgcaacctac
ggcggccgcagcgagaatttcattgaagagcgtcagtatgaaaaacctctcaatatttat
ggctactccaagttcctgtttgaccagtatgtccgcgacattttgccacaggcggattct
caaatttgtggcttccgttatttcaatgtttatggaccacgcgaagggcataaaggcagc
atggccagtgtcgcctatcatttaaacaatcagattcaccaaggccaaaatccgaagtta
ttcgccggtagtgaacatttccgccgcgatttcatctctgtcggtgatgttgccgcagtg
aacctgtggttctggaaaaacagcgtttctggcatttttaattgtggtacgggccgcgcc
gaatctttccaagccgttgccgatgccgttaccgagttccatacagaaaaatcccctgtc
gtggaatatattgaattcccagaaaaattaaagggacgctatcagagttttactcaagct
gacctgacaaaacttcgtgctgcaggttatgacaaaccattcaaaaccgttgccgaaggc
gtcactgaatatatgcaatggctcaatcaggataattaa
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