Xanthomonas campestris pv. campestris 8004: XC_3307
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Entry
XC_3307 CDS
T00247
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Pathway
xcb00020
Citrate cycle (TCA cycle)
xcb00270
Cysteine and methionine metabolism
xcb00620
Pyruvate metabolism
xcb00630
Glyoxylate and dicarboxylate metabolism
xcb00680
Methane metabolism
xcb01100
Metabolic pathways
xcb01110
Biosynthesis of secondary metabolites
xcb01120
Microbial metabolism in diverse environments
xcb01200
Carbon metabolism
Module
xcb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xcb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xcb_M00012
Glyoxylate cycle
xcb_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XC_3307
00620 Pyruvate metabolism
XC_3307
00630 Glyoxylate and dicarboxylate metabolism
XC_3307
09102 Energy metabolism
00680 Methane metabolism
XC_3307
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
XC_3307
Enzymes [BR:
xcb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
XC_3307
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Motif
Pfam:
Ldh_1_C
Ldh_1_N
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AAY50351
UniProt:
Q4URH2
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All DBs
Position
complement(3960784..3961770)
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AA seq
328 aa
AA seq
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MKAPVRVAVTGAAGQIGYALLFRIASGEMLGKDQPVILQLLELSNEKAQAALKGVMMELE
DCAFPLLAGMVGTDDAEVAFKDIDVALLVGARPRGPGMERKDLLLENAKIFTAQGAALNK
VAKRDVKVLVVGNPANTNAYIAMKSAPDLNPKNFTAMLRLDHNRALSQLSLKLGKPVGGI
EKLVVWGNHSPTMYPDYRFATSDGASIGDAINDQEWNAGTFIPTVGKRGAAIIEARGLSS
AASAANAAIDHVRDWVLGSNGKWVTMGVPSDGSYGIPEGVIFGFPVTTENGQYTLVKDLP
IDDFSQKYIDKTLAELEEERSGVSHLLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacccgttcgtgttgctgtgaccggcgctgccggccagatcggctatgccctg
ctgttccgcattgcctccggcgaaatgctgggcaaggaccagccggtgatcctgcagttg
ctggaactgtccaacgaaaaagcccaggccgcgctcaagggcgtgatgatggagctggaa
gactgcgcgttcccgctgctggccggtatggtcggcaccgacgacgccgaagtggcgttc
aaggacatcgacgtcgccctgctggtcggtgcgcgtccgcgcggcccgggcatggagcgc
aaggacctgctgctggagaacgccaagatcttcaccgcgcagggcgctgccctgaacaag
gtcgccaagcgtgacgtcaaggtgctggtggtcggtaacccggccaacaccaatgcctac
atcgcgatgaagtcggcgccggatctgaacccgaagaacttcaccgccatgctgcgcctg
gaccacaaccgtgcgctgagccagctctcgctcaagctcggcaagccggtcggcggcatc
gagaagctggtggtgtggggcaaccacagcccgaccatgtacccggattaccgtttcgcc
acctccgatggcgcgtccatcggcgatgcgatcaacgaccaggaatggaacgccggcacc
ttcatcccgaccgtgggcaagcgcggcgcggcgatcatcgaagcgcgcgggctgtcgtcg
gccgcatcggctgccaatgccgccatcgatcacgtgcgtgactgggtgctgggcagcaat
ggcaagtgggtcaccatgggcgtgccgtccgacggttcctacggcattccggaaggcgtg
atcttcggcttcccggtcacgaccgagaacggccagtacaccctggtcaaggatctgccg
atcgacgacttcagccagaagtacatcgacaagaccctggccgagctggaagaagagcgc
agcggcgtgtcgcatctgctgggctga
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