Xanthomonas campestris pv. campestris 8004: XC_4243
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Entry
XC_4243 CDS
T00247
Name
(GenBank) tetracycline-efflux transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
xcb
Xanthomonas campestris pv. campestris 8004
Brite
KEGG Orthology (KO) [BR:
xcb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xcb02000
]
XC_4243
01504 Antimicrobial resistance genes [BR:
xcb01504
]
XC_4243
Transporters [BR:
xcb02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
XC_4243
Antimicrobial resistance genes [BR:
xcb01504
]
Gene variants
Tetracycline resistance genes
Transporters
XC_4243
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_2
Sugar_tr
MFS_4
TRI12
Motif
Other DBs
NCBI-ProteinID:
AAY51281
UniProt:
A0A0H2XCH1
LinkDB
All DBs
Position
complement(5029766..5031028)
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AA seq
420 aa
AA seq
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MSISPDSASAPAPGRRRAALIFIFITVLIDVLSFGVIIPVLPDLVRQFTGGDYAAAAGWI
GWFGFLFAAIQFVCSPLQGTLSDRYGRRPVILLSCLGLGLDFILMALAHTLPMLLLARVI
SGVCSASFSTANAYIADVTPADKRAGAFGMLGAAFGIGFVAGPLIGGWLGSIGLRWPFWF
AAGLALLNVLYGWFVLPESLPPERRTARLDWSHANPFGALKLLRRYPQVFGLASVVFLAN
LAHYVYPSIFVLFASYQYHWGPREVSWVLAGVGVCSIIVNAVLVGRIVRWLGERRALLLG
LGCGVIGFVIYGLADSGHTFLLGVPISAFWAVAAPAAQALITREVGADAQGRVQGALTSL
VSLGGIAGPLLFANVFAWFIGSGAPLHLPGAPWLLAGLLLAAGWFMAWKRAGRSPALAQG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctctcctgattccgcatccgctcccgctccgggccggcgccgcgccgcactg
atcttcatcttcatcaccgtgctgatcgacgtgctgtccttcggcgtcatcatcccggtg
ctgcccgatctggtcaggcaattcaccggcggcgactatgcagccgcagctggctggatc
ggctggttcgggtttctgttcgccgccatccagttcgtgtgctcgccgttgcagggcact
ttgtccgaccgctacggccgccgcccggtgatcctgctgtcgtgcctggggctgggcctg
gacttcatcctgatggcactcgcccacacgctgccgatgctgctgctggcgcgggtgatt
tcaggcgtgtgctcggccagcttttccaccgccaatgcctacatcgccgatgtcaccccg
gccgacaagcgcgccggcgcgttcggcatgctcggcgccgcattcggcattggctttgtc
gccggcccgttgatcggtggctggctgggcagcatcggcctgcgctggccgttctggttc
gccgctggcctggcgctgttgaacgtgctgtacggctggttcgtgctgcccgaatcgctg
ccgccggagcgccgcaccgcgcggttggactggtcgcatgccaacccgttcggtgcgttg
aagctgctgcgccgctacccgcaggtgttcggcctggcctcggtggtgttcctggccaac
ctggcccattacgtctaccccagcatcttcgtgctgtttgccagctaccagtaccactgg
ggcccgcgcgaggtgagctgggtgctggccggtgtcggggtgtgcagcatcatcgtcaac
gccgtgctggtcggccgcatcgtgcgctggctgggtgagcggcgcgcgctgttgctcggc
ctgggctgcggcgtgatcggctttgtgatctacggcctggccgacagcggccacaccttt
ctgctgggcgtgccgatcagtgccttctgggcggtggccgccccggctgcgcaagccttg
attacccgcgaagtcggtgccgacgcccagggccgcgtgcagggcgcgctcaccagcctg
gtcagcctgggcggcatcgccggcccgctgttgttcgccaatgtcttcgcctggttcatc
ggcagtggcgcgccgctgcacctgcccggcgccccctggttgctggccggcctgctgctg
gccgcgggctggttcatggcctggaagcgggcagggcgcagcccggcactggcgcagggc
tga
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