Xanthomonas citri subsp. citri Aw12879: XCAW_03030
Help
Entry
XCAW_03030 CDS
T02519
Symbol
fadB
Name
(GenBank) 3-Hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
xci
Xanthomonas citri subsp. citri Aw12879
Pathway
xci00071
Fatty acid degradation
xci00280
Valine, leucine and isoleucine degradation
xci00310
Lysine degradation
xci00362
Benzoate degradation
xci00380
Tryptophan metabolism
xci00410
beta-Alanine metabolism
xci00640
Propanoate metabolism
xci00650
Butanoate metabolism
xci00907
Pinene, camphor and geraniol degradation
xci00930
Caprolactam degradation
xci01100
Metabolic pathways
xci01110
Biosynthesis of secondary metabolites
xci01120
Microbial metabolism in diverse environments
xci01200
Carbon metabolism
xci01212
Fatty acid metabolism
Module
xci_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
xci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
XCAW_03030 (fadB)
00650 Butanoate metabolism
XCAW_03030 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XCAW_03030 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XCAW_03030 (fadB)
00310 Lysine degradation
XCAW_03030 (fadB)
00380 Tryptophan metabolism
XCAW_03030 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XCAW_03030 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XCAW_03030 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XCAW_03030 (fadB)
00930 Caprolactam degradation
XCAW_03030 (fadB)
Enzymes [BR:
xci01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XCAW_03030 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
XCAW_03030 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
XCAW_03030 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
ApbA
AlaDh_PNT_C
MORN
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AGI08806
LinkDB
All DBs
Position
3374587..3376668
Genome browser
AA seq
693 aa
AA seq
DB search
MLPGFDGLRFSHWQADLREDGVVVLSLDRQGAPVNAFSQEVLLELGALVERLALDPPTGV
VLRSGKPNGFIAGADLKEFQEFDRKGTVNDAIHRGQQVFQKLAELPCPTVAAIHGFCMGG
GTEIALACRYRVASDDGSTRIGLPETKLGIFPGWGGSARLPRLIGAPAAMDLMLTGRTVS
AKAARAMGLVDKVAAPAVLVDAAASLALAGTTRAFKQRATAWATNTLLARKLLAPQMRKQ
VGRKARKEHYPAPYALINVWERAGGSGIQARLAAERKAVVKLASTPTARNLIRIFFLTER
LKGLGGKDAAGVAVAPIRHVHVIGVGVMGGDIAAWAAYKGFDVTLQDREQRFIDTALTRG
GELFAKRVKDDAKRPAVAARLRGDLAGAGVTQADLVIEAIIENPQAKRDLYQSIEPQLKP
DALLTTNTSSIPLTDLRGHIQRPAQFAGLHYFNPVAMMPLVEIVQHDGLDPANVARLAAF
CKTLDKFPVPVAGTPGFLVNRVLFPYLLEAATAYAEGIPGPVLDKTAVKFGMPMGPIELI
DTVGLDVAAGVGAELAPFLRLPIPAALATVEAGKRGKKDGQGLYKWENGRAVKPEVASGY
AAPADLEDRLILPLLNEAVACLHDGVVADADLLDAGVIFGTGFAPFRGGPIQYIRSVGAD
ALLERLQALHARYGERFAPRPGWDSPLLREAVA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaggtttcgacgggctccgattcagccattggcaggccgatctgcgcgaggac
ggcgtggtcgtgctcagcctcgatcggcagggcgcaccggttaacgcattttcgcaggag
gtactgctggagctgggcgccttggtcgaacggctggcgctggatccgccaacgggtgtg
gtgctgcgttcgggcaagcccaacggcttcatcgccggtgccgatctgaaggaattccag
gaattcgaccgcaagggcacggtcaacgatgcgatccatcgtggacagcaggtcttccag
aagctagccgaactaccgtgccccaccgtcgcggcgattcacggcttctgcatgggcggc
ggcaccgaaatcgcgctggcctgccgctaccgcgtggcttccgacgatggcagtacgcgc
atcggactgccggaaaccaagctcggcatcttccctggttggggcggcagcgcccgcttg
ccgcgcctgatcggtgcgccggcggcgatggatctgatgctcaccggccgcacggtgtcg
gccaaggccgcgcgcgcgatgggcctggtcgacaaggtcgccgcgcctgccgtgctggtg
gatgcggccgccagcctggcgctcgccggcaccacccgtgcgttcaagcaacgcgccacc
gcatgggccaccaacaccttgctggcgcgcaaactgctggcgccgcagatgcgcaagcag
gtggggcgcaaggcgcgcaaggagcattacccggcgccctatgccttgatcaacgtctgg
gagcgggcgggcggtagcggcatccaggcgcgcctggcggccgaacgcaaggcggtggtc
aaactcgccagcacgccgaccgcacgcaacctgatccggatcttcttcctgaccgagcgt
ctgaaagggctgggcggcaaggacgcagccggcgtggccgtagccccaattcgccatgtg
catgtgatcggcgtcggcgtcatgggcggcgatatcgccgcctgggcggcttacaagggc
ttcgacgtcacattgcaggaccgcgagcagcgttttatcgatacggcgctgacacgcggt
ggcgagctgttcgccaagcgcgtcaaggacgatgccaagcggccggcagtggcggcgcgt
ctgcgcggcgacctggccggcgcgggcgtgacgcaggccgacctggtgatcgaggcgatc
atcgaaaacccgcaggccaagcgcgatctgtatcaatcgatcgagccgcaactcaagccg
gatgcattgctgacgaccaatacctcgtcgattccgctgaccgacttgcgtggccacatc
cagcgcccggcgcaatttgccggcctgcactacttcaacccggtggcgatgatgccgctg
gtggaaatcgtgcagcacgatggcctggatccggccaacgtcgcgcgcctggctgcgttc
tgcaagaccttggacaagttcccggtgccggtggccggcacgccgggtttcctggtcaac
cgggtgctgttcccctacctgctcgaagcggccaccgcgtatgccgagggcattcccggc
cccgtgctggacaagacggcagtgaagttcggcatgccgatggggccgatcgaattgatc
gacaccgtgggcctggatgtggcggccggcgtgggtgccgagttggcgccattcctgcgt
ttgcccatcccggcggcactggcgaccgtggaagccggcaagcgcggcaagaaggacggc
cagggcctgtacaagtgggagaacggacgcgccgtcaaacccgaggttgccagcggttac
gctgcaccggcggatttggaagatcgcttgatcctgccgctgctcaacgaagcggtagcg
tgcctgcacgacggcgtggtggccgacgcagacctgctggacgccggcgtcatcttcggc
acaggtttcgcacctttccgtggcggcccgatccaatacatccgcagcgtcggcgcagac
gcgctactggagcgcctgcaggccttgcatgcccgttatggcgaacgcttcgcgccgcgc
ccggggtgggactcaccgttgttacgggaagcggtggcctga
DBGET
integrated database retrieval system