KEGG   Xanthomonas citri subsp. citri Aw12879: XCAW_03836
Entry
XCAW_03836        CDS       T02519                                 
Symbol
ribD
Name
(GenBank) Pyrimidine reductase, riboflavin biosynthesis
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xci  Xanthomonas citri subsp. citri Aw12879
Pathway
xci00740  Riboflavin metabolism
xci01100  Metabolic pathways
xci01110  Biosynthesis of secondary metabolites
xci01240  Biosynthesis of cofactors
xci02024  Quorum sensing
Module
xci_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xci00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    XCAW_03836 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XCAW_03836 (ribD)
Enzymes [BR:xci01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     XCAW_03836 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     XCAW_03836 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AGI09601
LinkDB
Position
complement(4283473..4284582)
AA seq 369 aa
MSEAATTASADDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHA
EVFALRAAGELARGATAYVTLEPCAHYGRTPPCALALIEAGVRRVVAAMADPFPQVNGGG
FALLREAGIEVLSGVMQAQARTLNRGFLSRVERGRPWLRVKLGASLDGRTALASGESKWI
TSADARADVQRWRARAGAILTGAGTVMADDPSMTVRLGEDTPVVPPLRVVLDARLRTLAC
RNIRQGDAPTLYLHGENVAAQSLDDAQFLAMPLHAGRFDLAAVLALLAERGINEVHVEGG
ATLSGALLQAGLVDELLVYMAPVLLGDTAKPLLAGLGIETMAQRAALQLLDVRQLGQDLR
LRYAPVVAG
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtgaggccgcaacgaccgccagtgccgacgaccatcgctggatggcgcaggcgttg
cgtctggccgagcgcggcgcctacaccacccgccccaatccgatggtgggctgcgtgatc
gtgcgcgatggcgtatgcgtgggcgagggctttcatcaacgtgccggcggcccgcatgcc
gaagtcttcgcgctgcgtgcagcgggtgagttggcgcgcggtgccaccgcgtatgtgacg
ctggagccatgcgcgcattacggacgcacgccgccgtgtgcgctggccttgatcgaggca
ggcgtcagacgtgtggtcgcggcgatggccgacccgtttccgcaggtcaatggcggcggt
ttcgcgttgctgcgcgaggcagggatcgaagtgctgagcggcgtgatgcaggcgcaggcg
cgcacgcttaaccggggatttctgtcgcgggtggagcgtgggcggccgtggttgcgggtc
aaactcggcgccagcctggacggccgtaccgcgctggccagcggcgaatccaaatggatc
accagtgccgatgcgcgtgcagatgtgcagcgctggcgcgcacgtgcgggcgcgatcctg
accggtgcaggtacggtgatggccgacgacccatccatgacggtgcggctgggcgaggac
acgccggtcgtgccgccgttgcgcgtggtgctcgatgccaggctgcggacgttggcgtgc
aggaacattcgtcagggcgatgcgcccacgctgtatctgcatggcgagaatgtggccgcg
cagtcgctggacgatgcgcagttccttgcgatgccgttgcatgccggccgcttcgatctg
gcggctgtgttggccctgctagccgagcgcggcatcaacgaagtccacgtggaaggcggc
gccacgctgagcggtgcgctgctgcaggccgggctggtcgacgaactgctggtctacatg
gccccggtgttgctgggcgacaccgcaaagcccttgctcgctggccttggcatcgaaacg
atggcgcagcgcgctgcgctgcagctgctggatgtgcgccagctgggccaggatctgcgt
ctgcgctatgcgccggttgttgccgggtga

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