Xiphophorus couchianus (Monterrey platyfish): 114133293
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Entry
114133293 CDS
T05908
Symbol
slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114133293 (slc6a4)
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
114133293 (slc6a4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
114133293
NCBI-ProteinID:
XP_027854881
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Position
18:complement(12469704..12489338)
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AA seq
673 aa
AA seq
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METKDMMMTSMSTMDKEENGGELDKGREEIEGQEEETQQENGRLVLADGLGDRGPKSLTS
GSGQQVSNGYTTSTPQSPREGSAPGSAAGAAPGPTGGTGLTGPLGGLRTLVVQQTSLERP
RETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELA
LGQFHRSGCISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRPTLPWT
TCTNSWNTANCNHYLSSDHNVSWSNSSTSPAEEFYTRHVLQVHLSPGLHQLGSISWQLAL
CLLFIFTIVYFSIWKGVKTSGKVVWVTATFPYLVLLVLLIRGATLPGAWRGVVFYLKPDW
EKLLSTTVWIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALVTSSVNCLTSFLSGF
VIFTVLGYMAEMRKQNVDDVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLD
STFAGLEGVITAMLDEFPHFLAKRREWFVLGLVCVCYLGALSTLTYGGAFVVKLFEEYAT
GPAVITVVLLEVIAVSWFYGTNRFCNDIQVMLGFYPGGFWRVCWVAICPCFLLFIIISFL
AFPPEVKLFHYQYPSWTTVLGYCIGVSSFICVPAYMVYHLLNSKGTFKQRLLKSITPQPS
TDNHRDLFVTNAI
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaggatatgatgatgactagcatgtcaacaatggacaaagaggagaacggg
ggagagctggacaaagggagagaggaaatagaggggcaagaggaggagacacaacaggaa
aatggtagattggttctggctgatggtctcggagatagaggaccaaagagcttgacctct
gggtccggtcagcaggtgtccaatggctacacaacctccacccctcagagccccagagag
ggatcggcaccgggatcagctgcaggggcagcgcccgggcccacagggggaactgggtta
acggggccgctaggaggtctgagaactctggtggtccagcagaccagcttagagaggccc
agagagacctggagcaagaagatggactttctgttgtctgtgatcggctatgctgtggat
ctcggaaacgtctggcgattcccatacatctgctaccagaatggaggaggtgcctttttg
ctgccctacctgttgatggctgtgtttggaggagtacctctcttctacatggagctagcg
ctaggccagttccaccgcagtggctgcatctccatctggaaacacatctgccccatcttc
aaaggaattggctttgccatctgcatcatagccctttacatcgccttctactacaacacc
atcatggcctgggccctctactacctactgtcatcttttcgacccaccctgccttggacc
acctgcaccaacagctggaacacagccaactgcaaccactacttgtcctcggaccacaat
gtgtcctggtccaactcgtccacgtcccccgccgaggagttctatacgcgccacgtgctc
caggtccacctgtccccaggtctgcaccagctgggatccatcagctggcagctggccctc
tgcttgctcttcatcttcaccatcgtctacttcagcatctggaagggagtcaagacgtct
ggaaaggtagtatgggtgactgcaacatttccctatctggttctcctggtccttctcatc
cgaggggccacgctgccaggggcgtggaggggcgtcgtcttctatctcaaacccgattgg
gagaagctgcttagcacgacggtatggatcgatgcggccgctcagatcttcttctccttg
ggtcctggctttggtgtgctgctcgccttcgccagctacaacccttttcacaacaactgc
tacaaagatgcactggtcacgagctcggtgaactgcctcaccagcttcctgtctggtttt
gtcatcttcactgttctggggtacatggcagagatgagaaagcaaaatgtggacgatgtg
gcgaaggacgcaggccccagcttgttgttcatcatttatgctgaagccatagccaacatg
cctgctgccacgttctttgccatcatcttcttcctcatgatcataatgttgggtctggac
agcacgtttgcaggtttggagggcgtaattaccgccatgctggatgagttccctcatttc
ctagctaagagacgggagtggtttgtccttggccttgtctgtgtgtgctaccttggggct
ctgtccactctcacatatggaggagcatttgtggtgaagctgtttgaggagtacgctacg
ggtcctgccgtcatcactgtagttctgctcgaagtcatcgctgtgtcctggttctatggt
accaaccgtttctgcaacgacatccaggtcatgctcggcttctatcccggtgggttctgg
agggtttgctgggtggccatctgtccctgcttccttctgttcatcatcatcagtttcctg
gcgttcccaccagaggtcaagctgttccactaccaatacccatcatggacaactgtcttg
ggctactgcattggagtgtcctcattcatttgtgtgcctgcttatatggtctaccactta
cttaactctaagggaacattcaaacagcgcctgttgaaaagcatcactcctcagcccagc
accgacaaccacagagatttatttgtgaccaacgcaatctga
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