Xiphophorus couchianus (Monterrey platyfish): 114141447
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Entry
114141447 CDS
T05908
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114141447 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xco04090
]
114141447 (vcam1)
04091 Lectins [BR:
xco04091
]
114141447 (vcam1)
CD molecules [BR:
xco04090
]
Proteins
114141447 (vcam1)
Lectins [BR:
xco04091
]
I-type lectins (Siglecs)
114141447 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
C1-set
Ig_5
ICAM1_3_5_D2
Ig_4
Ig_C17orf99
ICAM_N
Lep_receptor_Ig
Motif
Other DBs
NCBI-GeneID:
114141447
NCBI-ProteinID:
XP_027867784
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MDGCLQLLSVVLLMSSWCVQGLRVSLSPRRPLLRLGSHQHMVCQVHDCPTEPSITWATVN
DRPLGASISANRTHSTLTFDPVKIEDEGQLTCKARCGDGRAESRASVGVYSFPSDPEIAG
QDRLRDRVEATLTCQVPNLYPAGDLNLTWVRGDTVLKSTRGSGSSSFRFLPLREDSGGSI
TCRATLELPGLPSDYRTRETTTTLNVRYAPGLMNISDPVAVMSGSPLTLSCSAEGNPEPT
ITWTAGGRPVPGGRRGQLILSAVKLSDAGRYECETRNSEGNQTAAVNVTVLAPPTSTSLS
VDPGEEVVEGQQVNFTCSSEGAPPPSLVLRRKGEELLRTESAPLLSFSLPSVSLEDSAHY
ECEASNQYGSQQESRSITVSAHPLQLYSSPQVSAERGSALILTCNASGCLHPPAFSWRRT
DRNRTLLQRTEPQDGQSHLHLLNLDLRHQGGYSCEAECDSVIRTREIHVQVYSFPSDPVL
EDPGPVQLGQEVQLRCDVTDIFSANQLRFRWLSGNRTLMAEMHRFSGSLQNVSSVLQLKA
EDAARVVTCSVELLTADRDVWRSRGTSIPLQIHYPPRSTVLSVCPGEEVLEGQRVTLTCH
SDGAPPPAVVLRRNGEELLRSDANSSSSLSLSISSTLLEESGLYQCEASNQYGSQLVSNF
ITVKAPPRNTTVHIFPSTEVQEGQNVTVCCQTISFPPPAVILKKLSNGTELFSTSGTFLL
VNVTSSDSGLYQVNVSNDLGSEVRVFSIRVREVRTGFPPGLSIILISAAGVAAGLTASAL
ILDYMRRSRKKGFYQLPQSAPPSA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggacggctgccttcagctcctctcagtcgtgctgctgatgtcatcgtggtgcgttcag
ggcctccgggtcagcctgtcgcccaggcggcctctgctccggctcggctcccaccagcac
atggtctgccaggtccacgactgtcccacagaaccgagcattacctgggccaccgtcaac
gaccgacccctgggggcgtccatcagcgccaacagaacccactccactctgacctttgac
cccgttaagatagaagacgaagggcagctgacgtgtaaggccagatgtggagatggacgg
gcggagagccgagcctccgtcggtgtttactcgttcccctcggaccctgagatcgccggg
caggaccgcctcagagaccgcgtggaggcgaccctcacctgccaggtgcccaacctgtac
cccgccggggacctgaacctcacctgggtccgaggagacacggttctgaagagcaccaga
gggtctgggtccagctccttccgcttcctgcccctcagggaggattcgggagggagcatc
acctgcagggcgacgctggagctaccgggtctgccgtcggactacaggaccagagagacc
accacaaccctgaatgtccgctatgctccaggcctcatgaacatctccgacccggtggcg
gtgatgtccggctcgccgctaactctcagctgttctgctgagggaaaccccgagccgacc
atcacctggacggcaggcggtcgccctgtgcccggaggtcgcagaggtcagctcatccta
tcggcggtgaagctttccgacgccggacggtacgagtgtgaaaccagaaactcagaagga
aaccagactgcagctgtaaacgtcacagttttagctccgcccaccagcacctccctctca
gtggatccaggtgaggaggtggtggagggccagcaggtgaatttcacctgcagctctgaa
ggagctccgcctcccagcctggttctgaggagaaaaggggaggaacttctgaggactgag
tccgcccccctgctcagcttcagccttccctccgtgtccctggaagactccgcccactac
gagtgtgaagcctccaaccagtatggctcccagcaggagtccaggtctatcactgtgagc
gctcacccgctgcagctgtattccagtcctcaggtgtcagcggagcgcggctcggctctg
atcctcacctgtaacgcctctggctgcctccacccgcctgccttcagctggaggaggacg
gaccggaaccggaccctcctccagaggacggagccgcaggatggccagtcccacctccac
ctgctgaaccttgacctccggcatcagggaggctacagttgtgaggccgagtgcgactcg
gtcatcaggaccagagagatccacgtccaggtctactcgttcccatctgaccctgttctg
gaggatcccggtccggtccagctgggccaggaggtccagctgcgctgtgatgtcaccgac
atcttctcggccaatcagctgcggttccgctggctgtcggggaaccggactctcatggcg
gagatgcacaggttctccggctccctgcagaacgtctcgtccgtcctgcagctgaaggcg
gaggacgcggcgcgggtcgtgacctgcagcgtggagctgctgacggcggaccgagacgtc
tggaggtccagaggaaccagcatccctctgcagatccactatcctccgaggtcgaccgtc
ctgtccgtctgtccaggtgaggaggtgctggagggccagcgggtgacgctgacctgccat
tcggacggcgctccgccccccgccgtggtgctgaggagaaatggggaggagcttctgagg
agcgacgccaactcctcttcctcgctttccctcagcatctcctccaccctgctggaggag
tccggcctctaccagtgtgaagcctccaaccagtacggctcccagttggtctccaatttc
atcaccgtcaaagctccccctaggaacactaccgtccacatctttccttctacggaagtc
caggagggccaaaatgtgactgtgtgctgccaaaccatcagcttccctccaccggcggtg
atcctgaagaagctgagcaacgggacggagctgttctccaccagcggcaccttcctgttg
gtcaacgtcacttctagcgactcgggcttgtaccaggtcaatgtcagcaacgacctgggc
tccgaggtcagagtcttcagcatcagagtcagagaggtcagaaccggatttcctcccggt
ttgagcatcatcctcatctcagccgccggcgtcgccgccgggctgacggcctccgctctg
atcctcgactacatgaggagatccaggaagaaaggcttctaccagctgccgcagtccgcg
ccgccgtcagcctga
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integrated database retrieval system
