Xiphophorus couchianus (Monterrey platyfish): 114142975
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Entry
114142975 CDS
T05908
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
114142975 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114142975 (mmp2)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
114142975 (mmp2)
Peptidases and inhibitors [BR:
xco01002
]
Metallo peptidases
Family M10
114142975 (mmp2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
Motif
Other DBs
NCBI-GeneID:
114142975
NCBI-ProteinID:
XP_027870441
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All DBs
Position
4:complement(7432603..7449256)
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AA seq
657 aa
AA seq
DB search
MGFPTISRCHRVILKVFLLQFIAFQATNARPSPIIRFPGDDTPRTDKEVALHYLNKFYGC
PQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVEIMKKPRCGVPDVANYNFFHRRPKWQ
KKDVTYRILGYSPDLDEEVINDAFYRAFKVWSDVTPLSFTRIMDGEADIMVNFGRNEHGD
GYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGEGQVVKVKFGNADGEFCKFPFLFM
GTEYNSCTSQGRDDGFLWCSTTYNFDEEGKYGFCPHELLFTLGGNGEGAPCKFPFSFQGE
SYDSCTTQGRDDGYRWCATTEDYDRDKSYGFCPETAMSTVGGNAEGSPCVFPFTFLGDSY
DSCTSSGRSDGKMWCATTKNYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGAL
MAPVYTFMKDFRLSHDDIQGIQELYGVPTDKPLPPTQGPVTPMDLCKDPVIFDAVAQIRG
ETFFFKDRFLFRSVNFRSKPSGPMLLATYWPDLPAKIDAAYENPVEEKTVFFSGDEMWVY
KADELERGYPKRLSSFGLPTDVQQIDAAFNFRKNRKTYLFSADKFWRYDESSKAMDPGFP
KLIAESWNGIPDDIDSAFSLNGIDYSYFFKGSHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgatatctaggtgtcatcgggttattttaaaagtgtttttgcttcag
tttatcgcttttcaagcaacaaatgcccgcccatctcctataatcaggtttcccggagac
gataccccgagaacagacaaagaagttgctctgcactatctgaataagttttatggctgc
ccacaagacagatgcaaccttatggtgctcaaagacactttgaagaaaatgcagaagttc
ttctccttgcaagaaaccggagaaatagatgccaagacggtggagatcatgaaaaaacct
cgctgtggtgtcccggatgtggccaattacaacttcttccataggagacccaagtggcag
aagaaggacgttacttacagaatcctgggctactctcctgacctggacgaggaagtcata
aatgatgctttctacagagcctttaaagtgtggagtgatgtcacgccactttcttttact
cgcatcatggatggagaagctgacatcatggttaattttggccgcaatgaacatggagat
ggttatccttttgatggcaaagatggtctcctggctcatgcctttgccccaggaccaggc
attgggggtgattcccattttgatgatgatgagcagtggaccttaggagagggccaagtg
gtgaaagtgaagtttggcaatgctgatggagagttctgcaaattccccttcctgttcatg
gggaccgagtacaacagctgtacatctcagggtcgagatgacggattcctgtggtgctcc
accacctacaactttgatgaagagggcaaatatggcttctgccctcatgagttacttttc
acccttggtggtaacggagagggcgcgccttgtaaattccccttcagctttcagggagaa
agctacgacagctgcaccacgcagggcagggatgatggataccgctggtgtgccaccact
gaggactatgaccgtgacaagtcctatggcttctgccctgaaactgcaatgtcaacagtg
ggaggaaatgcagagggaagcccctgtgtctttcctttcaccttccttggagacagctat
gactcctgcacttcttctggacgcagtgatgggaaaatgtggtgtgctaccactaagaac
tacgacgatgaccggaaatggggtttctgtcctgaccaaggctatagcttgttcctggtg
gcggcccatgagtttggtcacgcccttggtttggagcattctcaggacccaggagctctg
atggctcctgtctatacttttatgaaagacttcagactttctcacgatgacatccaaggc
atccaagagctctatggtgtgccaaccgacaagcctttgcctccaacccagggtcctgtc
actccaatggacctttgtaaagatccagttatctttgatgctgttgcacaaatcagagga
gagacatttttcttcaaagacaggttcctgttcaggtcagtgaacttcaggagcaaaccc
agtggccctatgctattggccacctactggcctgacctccctgcgaagatagacgctgcc
tatgaaaatccggtggaggagaaaacagtcttcttctcaggtgatgagatgtgggtttac
aaagccgatgagctggaaagaggttacccgaagaggctctccagctttggcctccctaca
gatgtgcagcaaatcgatgctgccttcaacttcaggaagaacaggaagacttacttattt
tctgcagacaaattctggagatacgatgaaagtagtaaggcaatggaccctggcttcccc
aagcttattgctgaatcctggaacggcattcctgatgacattgactctgctttcagtctg
aacggcattgattacagctacttctttaaaggaagccactatttcaaacttgaagacagc
agtttgaagatcgtcaagttgggagaaatcacaaaggactggcttggttgctga
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