Xiphophorus couchianus (Monterrey platyfish): 114143997
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Entry
114143997 CDS
T05908
Name
(RefSeq) integrin alpha-L-like
KO
K05718
integrin alpha L
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecules
xco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114143997
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
114143997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114143997
04515 Cell adhesion molecules [BR:
xco04515
]
114143997
04090 CD molecules [BR:
xco04090
]
114143997
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114143997
Cell adhesion molecules [BR:
xco04515
]
Integrins
Integrin alpha subunits
114143997
CD molecules [BR:
xco04090
]
Proteins
114143997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
DUF6418
Motif
Other DBs
NCBI-GeneID:
114143997
NCBI-ProteinID:
XP_027872214
LinkDB
All DBs
Position
5:17693484..17711330
Genome browser
AA seq
1169 aa
AA seq
DB search
MYAPRRFHLLIYMILTAAAIPITSAFNIDTTNSTVLPGKKEDFFGYKVLQYESPKNKGVI
VTAPLRLNGSGGISKIDQNGAKLWFNGSSHPYSAKHLGLSIATDTKSRFIACSPSLAHPC
DENVYLNSLCYNFTDDFELTSSFKPLFQKCIEKVVNLVFLFDGSESMTTTEFNKNKKFII
DIMNQLKNTSFKFAAVQFSTLCRTVFNFKDYADGTAQDKLTNEVHMKGLTNTHKALNFTL
HNLLENESAGASKNANKAVVIITDGDPSDLDKSFQSVATYNRKEITRVVIGVKIQEDKFD
KLKTIASEPKNNNVFKIENYDGLTGILGSLQKQIFAIEGSNRTRSDKLNTEMAQSGFSVV
SHKDTLILGSVGSNTWRGTLNEYQTQNKVILDPDMQEASYMGYTLSVGERNGISLYFTGA
PRFNHMGQVVVFRRDEDKFPVVQRITVDQIGSYFGAELCSVDIDTDGNTDFLLVGAPMFF
LPEERKEGSIYIYAISDKIDLMMVLQVKAPSMGRFGTTISSLADLNGDGLRDVAVGAPLE
ENNAGAVYIYLGQRGTGMRNISSQRITGAQFDPALTFFGQSINGDIDLGKDRLPDIVVGS
QGAAVVLRSKPVLDVKAKLSFYPNVISIQEINCLDKTEDKPLPMTNITACFEMVEVTNST
AGPGIKISLMLNVDPMRQSNRGFFIENGANSRNIIRTHELTDKETCFNYSISMNKCIQDT
LSPVNIKLNFSQDFNNHSTAILSIDSQIQAMVEVPFEKHCEKEICIADLKVDFNFQSEEL
LVTKDSSIKIWIKLDNMADDSYNTSLTMLYPQGLSFSMLDQKGNKKLTQICADQEKLNET
ICGISLPVYRSKSSAEFIATFRTKDFEWNDTLLMTIFAESENSNSSKSSSMTKSIPVKYS
VEMAIAVNDTSDDNLKFTPENYTTQKLTTVYNIRNTNFKDFPISVFLFFQEKLEHDFEMT
NYKVNVKPNKTQCSKFSTPKAEDCPWKENCVAIKCDTFMLKNYSDVYISLLGDVHFRNLK
NYESNMPFLKKYTGVHGEVKFNSSIKVRYDGSRYVMKQEKNKNYAIEKSTGVVVEFKVSQ
HRNLIIATGVIMGFILLIILTIIMWKCGCFKRKTIEDFNEEMAGQIITSSVPSLNKSEQV
KEEKKPLNADEDKDKPPANPEGVCENVDL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaccacggcgcttccatctgctcatctacatgattttgacagctgcagccatc
ccaattacttcagctttcaacattgatacaacaaactctaccgttcttcctggcaagaag
gaagatttctttggatacaaggtgcttcagtacgagtcacccaagaacaaaggggtaatc
gttactgcaccgctgcggctaaatgggtcagggggcatctccaagatcgaccaaaatggc
gctaaattgtggttcaatggttcttcacatccgtattcagccaagcatcttggcttgtca
atagccacggatacaaaatcccggtttattgcctgcagtccaagccttgctcatccatgc
gatgagaatgtctacctgaacagtttgtgttacaacttcacagatgattttgagctgacc
tcttctttcaagcctttgttccaaaaatgcatagaaaaggttgtaaaccttgtgtttctg
tttgatggatccgagagcatgactacaacagaatttaataaaaataaaaaattcataata
gacataatgaaccaacttaaaaacacatctttcaagtttgcagcagttcagttctcaaca
ttgtgcaggacagtgttcaactttaaggattacgctgatggtactgctcaagacaaactt
accaatgaagtgcatatgaagggtctaaccaacacacacaaggcccttaactttacactg
cacaatctcttggaaaatgaatcagcaggagcctcaaaaaatgcaaataaagctgtggtg
ataatcacagatggagatccaagtgatctggataaaagtttccagagtgttgcaacctat
aatcgcaaagagatcactcgagttgttattggggttaagattcaagaagataaattcgac
aaattaaaaacaattgcatcagaaccaaaaaataataatgtgttcaaaattgaaaactat
gatggacttactggaatactgggaagtttgcaaaaacagatcttcgctatagaaggatct
aataggactcgatctgataaactgaatactgaaatggctcaaagtggattcagtgtcgtc
tcacacaaggacaccttgattctgggctcagtgggttcaaacacctggcgtgggactctc
aatgagtatcagacacaaaacaaggtgattttagacccagatatgcaagaggcctcctac
atgggatacactctttctgttggagaaagaaatggcatttctttatatttcactggcgcc
ccacgtttcaaccacatgggacaggttgtagtttttcgacgtgatgaagacaagtttcca
gtagtccaaagaataactgtggaccagattggctcctattttggtgcggagctgtgctct
gtggacattgacacagatggtaacactgatttcctgctggttggcgctccaatgtttttc
cttcctgaggagagaaaagaagggtcgatctacatctacgcaatatctgataagatcgac
ttaatgatggtgcttcaagtgaaagcaccgtccatgggtagatttggcaccaccatatcc
agtcttgcagatctgaatggagatggtctccgagatgttgcagtgggagcccccctggaa
gagaacaacgctggagcggtctacatctaccttggacaaagaggcacagggatgcgcaac
atttccagccagagaatcacaggagcacaatttgatcctgcattgacattttttggtcag
tccatcaatggagacatcgatctcggaaaggataggttgccagatattgtggtgggatcc
caaggtgctgctgtggtcttaaggtccaaacctgtgttagatgtcaaggctaagctgtca
ttttatcccaacgtgataagcattcaggaaatcaactgcttggataagacggaggacaaa
ccattaccaatgactaacataacagcttgctttgaaatggtagaagtaacaaacagcact
gcagggccaggaatcaagatctcactcatgctcaatgtggatccaatgaggcaatcaaat
cgaggtttcttcattgaaaatggagcaaatagccggaatattatacgtacccatgagctg
actgacaaggaaacatgcttcaactattctatctccatgaataaatgcatacaagacaca
ttatctcctgtcaacatcaagctaaacttttcccaagatttcaacaaccattcaacagcc
attcttagcatagacagccaaatacaggcaatggttgaggttcctttcgaaaaacactgt
gaaaaagaaatctgcattgctgatcttaaagtggattttaattttcagtctgaggaacta
ttagtgacaaaagatagcagcatcaaaatatggataaaactcgataatatggctgatgac
tcatacaacaccagcctgacgatgctctaccctcaaggactctctttctcaatgttggat
caaaaagggaacaagaaactaactcaaatctgcgctgaccaagaaaaacttaatgagacc
atttgtgggataagccttcctgtatatcgcagcaaatcctctgctgagtttattgctact
tttcgcaccaaagattttgagtggaatgacacattgctgatgacaatctttgcagaaagt
gaaaattctaactccagcaagagttcttctatgaccaaaagtattcctgtaaaatattct
gttgaaatggcaatagcagtaaatgacacatctgatgacaacctgaagttcactccagaa
aattatacaacacaaaaactgacaactgtatacaatatacgcaacacaaattttaaggat
tttcccatcagtgtattcctcttcttccaagagaaactggaacacgactttgaaatgaca
aactataaagttaatgtcaagccaaataaaactcagtgctcaaagttttccaccccaaaa
gctgaggactgcccatggaaagaaaactgtgtggccataaaatgcgatacatttatgtta
aaaaactattcagatgtttacatttccctgttgggggatgtgcatttccgaaatctgaaa
aactacgaatcgaatatgccctttctgaaaaaatatactggagtccacggagaggtcaaa
tttaacagctctataaaagttcgctatgatggtagtagatacgtgatgaaacaagagaaa
aacaagaactacgcaatagaaaaatcaactggagttgtagttgaatttaaggtgtctcaa
catagaaatctgatcattgcgactggtgtaataatgggatttatccttctgatcatactc
acgatcatcatgtggaagtgtggctgctttaagaggaaaaccattgaggatttcaatgag
gaaatggctggtcagataataacctcatctgtgccatcccttaacaaatctgaacaagtg
aaagaggaaaaaaaacctcttaatgcagatgaggacaaagacaaacccccagctaatcct
gaaggagtctgtgaaaacgtggatctttag
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