Xiphophorus couchianus (Monterrey platyfish): 114144246
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Entry
114144246 CDS
T05908
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114144246
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114144246
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
RasGEF_N_2
WbqC
KfrA_N
Motif
Other DBs
NCBI-GeneID:
114144246
NCBI-ProteinID:
XP_027872657
LinkDB
All DBs
Position
1:complement(4130820..4182294)
Genome browser
AA seq
1846 aa
AA seq
DB search
MSNLLAIEMPIKMIHLSLLLLALTAFGQELPSIPHGCTDGSCYPATGNLLIGRAVNLTAT
STCGLDGPEQFCIVSYLQDPEKCFECDSRRRYDPRHHRNSHRIENVIYLTDINGNENFWK
SVNGKEDVSIRLNLEAEFHFTHLIMKFKTFRPAALIIERSADFGRTWRPYRYFAKNCTRT
FPGIPANGLHHTNDIICEERYSDIEPSKDGEVIFKVLDPAIPVEDPYSLDIQELLRITNL
RINFTKLNTLGDDLLDRRSDVLQKYYYAINELVVRGSCFCYGHASECAPVPGVNTHETGM
IHGRCVCKHNTEGLNCERCKVFHNDSPWRPAETEDPHTCRECNCNGHTNQCHFDMAVYLA
TGNTSGGVCDNCLHNTVGRNCEMCKPFYYQDPNRDIRDPRVCVACDCDPVGSLEGGVCDS
HTDLGMGMITGQCRCKDNVKGKRCDDCKAGYYGLSESDPLGCQPCNCDPRGVILMDAPCD
QISGDCSCKRYVTGRYCNQCLPEYWGLSNDLVGCRPCECDFGGAFNNRCMMDSGQCDCRR
HFIGRRCSEVQPGYFCAPLDYYKYEAEEAAGRSPTDPSLPGQVRPQAADDCIQQLSNQAR
RHRRHRRISSLQQSQAALRRIRQLQQTPDVMTVHREHTPSHITTWTGPGFARVKDGAGLV
FTIDNIPYAMEYEVMIRYEPESTEDWEAVVSITSAELPSSLRCGNLLPTEQLYTETLLHS
NRYILMSRPFCFEPSNRYVVAIRFQRHGVGYRHLTAFILIDSLVLIPKYTELPGFHGSDP
DTEQHRKDMVRYMCLDSFMITPMPMLAEMCTKLICGISANIHDGALPCQCDPQGSISGEC
DKVGGQCRCKANVIGRRCDQCAPGTYGFGVNGCNACDCHPEGSFSHQCDPVTGQCPCRQG
ATGRQCSDCQPGQWGFPSCSPCQCNGHADLCDSRTGECRGCRDNTAGHLCERCVESFYGN
PVLGSGDHCHPCPCPGNPGSNHFNGHSCQADHTSDQIICYCKPGYTGPRCDQCAPGYYGN
PEQPGGQCLRCECNDNIDPQDPESCDPRTGQCLRCLYHTDGPSCSLCEEGYFGNALIRDC
RRCTCVTAGTVESACSEGQCLCDHYTGACPCRGSVMGNNCDQCAPNHWNYGQAEGCQPCN
CDQRHSERDRCNMFTGQCPCWPGFGGQRCTECQEHHWGDPEVECRECSCHPLGSQTRQCN
RATGQCDCKDGMAGLRCDECARGFTGVFPNCVPCHQCFDQADDHLCQIRRDLEHIQYAVQ
KILESGITPGVGINRIMELEQKLNQVRNLIDTGSTEQIHQLIGQSIDDLRPEIVLINSRL
AGIDQDTNKTKEADEVLKRALTDLEKELMDVNATLARKQELLDKYLTSGFSDQFDKVKKY
YQLSQQAEERCNASVLFPTSPVEQSKQNRGITEKMLNATKDELLRNLTAHNNSLNELHQK
TQNLSETVRHLSQMVCGGASNDSQNGSCSDNRCGCHDNQGNFVCGGEGCDGTKSSSLTAL
KDATNLTDSLKAAMKELQGVTKKLQDIASQTQDVKNRTMNALEKAQKKKEYFEKSNKDLK
DLIKTIKDFLTEEGADPESIQKVAQQVLDIKLPINRTTVDKLINQINSSIANLTNVQDIM
NQTSQLIRNAQDLMNKAKEAERQAVGVRDLVNSTKQALNVSEVAIEKAKAALKEARDNLN
RTKNSTAEVENGLVQLEDKQMDIMMRLTNLSKGVEALKNKTEINRLMAKDAINLANNASH
QASTLEQELNVTEKRYRELQLKMETLGSSGSLNNIQQKVKDMTKAAEDLLSKANNGINDL
DKLGELLKNNEERMKEQLVELEGLKQNATDVRDQIQKGVQKYSTCS
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacctcttggccattgagatgcccatcaaaatgattcatttgagccttctgttg
ctggctctgactgcatttggacaggagcttccgtcgatccctcacggctgcaccgacgga
agctgttaccctgcaaccggaaaccttctgattggacgagctgtcaatctgaccgccacc
tcaacatgcggtctggacggaccggagcagttttgcattgtcagctacctgcaggatcca
gaaaagtgtttcgagtgtgactcccgtcggcggtatgatccccgccaccacagaaacagc
caccgcattgaaaacgtgatctacctcacagacatcaatgggaatgagaacttttggaag
tctgtcaatggtaaggaggacgtcagcatcagactgaaccttgaggctgaattccacttc
acacatctcatcatgaagtttaagacgtttcgccccgcagctttgatcatagagcgatca
gctgattttggccgcacatggcgcccctaccgctacttcgccaagaactgtaccagaact
ttccctggaatccccgccaacggcttgcaccataccaacgacatcatctgtgaagaacgc
tactctgatatcgagccctctaaagatggagaggtcatttttaaagtgctggatccagca
attccagtagaagatccctacagcttggacattcaagaacttttgcgcatcaccaacctg
cgcatcaacttcacgaagctcaacacgctgggagacgacctgctggaccgccgctcggac
gtcctgcagaaatattactacgccattaatgagctggtggtccgaggaagctgcttttgc
tacggacacgcttcagagtgcgcaccagtgccgggcgtaaacacccatgagactggcatg
atccatggccgctgtgtttgcaagcacaatactgaagggctgaactgcgagcgctgcaag
gttttccacaatgactcaccttggagaccagcggagacagaggacccacacacatgcaga
gagtgtaactgcaacggccacacaaaccagtgtcactttgacatggcggtgtatttggcg
acgggcaacaccagcggtggagtttgtgataactgtctgcacaacacagtgggacgcaac
tgtgagatgtgcaaaccgttctactaccaagaccccaacagggatatccgggaccctcgt
gtctgtgttgcttgcgactgtgacccggttggatcattggagggaggtgtgtgtgacagc
cacaccgacctgggaatggggatgatcacaggacagtgtcgctgcaaagacaacgtgaag
ggcaagcgctgcgatgactgcaaggcgggttattatggactcagtgagagcgacccactg
ggatgccaaccttgcaactgtgacccccggggcgtcatactgatggatgctccttgtgat
cagatcagtggggactgctcctgtaaaagatacgtcacaggtcgctactgcaaccagtgt
ctgcctgaatactggggtctcagtaatgacctggttggctgcagaccttgtgagtgcgac
ttcggtggagcgttcaacaacagatgcatgatggatagtgggcagtgcgactgcaggagg
catttcattggtcgacggtgttcggaggtgcagcctgggtatttctgtgctccactcgac
tactacaaatacgaggctgaagaggctgccgggcgctcgcccaccgatccctcgctgccg
ggccaggtccgcccgcaagcagcagacgactgcattcagcagctcagcaaccaggccagg
aggcatcggcgacaccggcgcatttcaagcctgcagcagtctcaggcagcgctgagacgc
atccggcagcttcagcagacaccggacgtcatgacggtccacagagagcacactcccagc
cacatcaccacctggaccggtcccgggtttgctcgcgtcaaagacggcgccggcttggta
ttcaccatcgacaacatcccatacgccatggagtacgaagtcatgattcgctacgagcct
gagtccacagaggactgggaggctgtagtcagcatcacctctgctgagctcccctcaagt
ctccgatgtggaaaccttcttccgaccgaacagctctacactgaaaccctgctgcacagc
aacagatacatcctgatgtccaggccattttgttttgagcccagtaatcgctacgtggta
gcaatcaggttccagcgacacggagtcggttacagacaccttaccgctttcattttgatt
gactcactggttttgatccccaagtacaccgagcttcctggtttccacggcagcgacccg
gacacagagcagcaccggaaggacatggtccgctacatgtgcctggattcctttatgatc
acgccgatgccaatgctggctgagatgtgcaccaaactcatctgcggcatctcagccaac
attcacgatggggccctgccatgtcagtgcgacccgcagggttccatcagcggcgagtgc
gataaggtcggaggtcagtgccgctgtaaagctaacgtcattgggcggcggtgtgaccag
tgcgccccaggaacctacggcttcggagtgaacggctgcaatgcctgtgactgccaccca
gagggctccttcagccaccagtgtgacccggttacaggtcagtgtccgtgcaggcaggga
gccaccgggcgccagtgctccgactgccaaccgggccagtggggcttccccagctgcagc
ccctgtcagtgtaacggccacgccgacctctgtgactcccggacaggagagtgcagaggc
tgcagggacaacacagcgggtcacctctgcgaacgctgtgtggaaagtttctacggcaac
ccagtgctcggctcgggggatcactgtcatccctgcccctgccctggaaaccctggttcc
aaccactttaatggccattcctgtcaagctgaccacacctctgatcagatcatatgttac
tgcaaaccaggctatacaggtcctcgctgcgatcagtgtgctccaggctactacggcaac
ccagagcagcccggtggacagtgtctccgctgcgagtgcaatgataacatcgacccccag
gatccggagtcatgtgaccccaggactgggcagtgcctcaggtgcctgtaccacacggac
gggccgtcctgttccctgtgcgaggaaggatacttcggcaacgctttgatcagggactgc
agacggtgcacctgtgtgactgctggcactgtggagtcagcctgcagtgaaggacagtgt
ctctgtgaccactacactggggcctgtccttgcagggggtctgtgatgggcaacaactgt
gaccagtgtgcccccaaccactggaattacggtcaggctgaaggctgccagccgtgcaac
tgtgaccagcggcattctgagagggaccggtgcaacatgttcacaggccagtgtccgtgt
tggcccggtttcggaggacaacgttgcaccgagtgccaagagcaccactggggcgaccca
gaggtggagtgtagagagtgctcctgtcacccgctgggctcacagacacgccagtgtaac
cgagcgacagggcagtgcgattgcaaggacgggatggcggggctccggtgcgatgagtgc
gcacgcggcttcacgggcgtcttccccaactgtgtcccgtgtcatcagtgcttcgatcag
gcggacgaccacttgtgccagatcagaagagacttggagcacatccagtacgctgtccag
aagatcctggagagcgggatcacgcccggagtcgggatcaaccgcatcatggagcttgag
cagaagctgaaccaggtgcgaaacctgattgatacggggagcacggaacagatccaccag
ctgattggacagagcatcgatgacctcagacctgagattgttctcattaactcacgtctg
gcgggaatcgatcaagacacaaacaaaactaaagaggcggatgaggtcttaaaacgcgct
ctgactgacctggagaaagaactgatggatgtcaatgctacgctggctcgcaaacaggag
ctgctggacaagtacctcacctcaggattttcagatcagtttgacaaagtgaagaagtac
taccaactgtcacagcaggctgaggagaggtgcaacgcctcggtgttgtttcctaccagt
ccagttgaacaatccaaacaaaatcgagggattaccgagaagatgctgaacgccacaaag
gacgagctcctccggaatctaaccgctcacaacaattcattaaacgagctgcatcagaag
acccaaaacctcagtgagacggtccgacatctcagccaaatggtgtgtggtggtgctagt
aatgacagccaaaatggcagctgctctgacaaccggtgtggttgccatgacaatcagggt
aactttgtttgtggaggagagggatgcgatgggacaaagagttcttctttgactgcgctg
aaggatgccacaaacctcaccgacagtctgaaagctgccatgaaggagctgcagggcgtc
actaagaagcttcaggacatagcttcccagacccaggatgtgaagaaccggacaatgaac
gctctggagaaagcccagaagaagaaagaatactttgaaaaaagcaataaagaccttaaa
gacttgattaagaccatcaaagacttccttacagaggagggagcagatcctgagagcatc
cagaaggtagcccagcaggtcttagatatcaagctgccgatcaacaggaccactgtggac
aaactgatcaaccagatcaacagcagcattgccaatctcaccaacgttcaggacattatg
aatcaaacttcgcagctcatccgcaatgctcaagacctgatgaacaaagctaaagaggca
gagagacaagcagtgggtgtgagggatctggtcaatagcaccaaacaggccttaaatgtc
tctgaagtggccatagagaaagcaaaggcagccctgaaggaggcccgggacaacctgaac
aggaccaagaactccactgctgaggtggaaaatgggttggtgcagcttgaggacaagcag
atggacatcatgatgcgtctaaccaatctgtccaagggggtggaagccctaaaaaacaag
acagagataaacagactaatggcaaaggacgccataaacctggctaacaacgccagtcac
caggcatccacactggagcaggagctaaatgtaacagagaaacgttaccgtgagctgcag
ttgaagatggagactcttggcagctctggaagtctgaacaacatccaacagaaggtcaaa
gatatgacgaaggctgcagaagatctcctcagtaaagccaataatgggataaatgatctt
gacaaactaggggaattattgaaaaacaacgaggagcggatgaaggagcagcttgtggag
ctggagggcctgaagcaaaacgccactgatgtgagagaccaaattcagaaaggagtgcag
aaatatagtacctgctcgtga
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