Xiphophorus couchianus (Monterrey platyfish): 114144461
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Entry
114144461 CDS
T05908
Name
(RefSeq) beta-galactosidase-like
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00052
Galactose metabolism
xco00511
Other glycan degradation
xco00531
Glycosaminoglycan degradation
xco00600
Sphingolipid metabolism
xco00604
Glycosphingolipid biosynthesis - ganglio series
xco01100
Metabolic pathways
xco04142
Lysosome
Module
xco_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
114144461
09103 Lipid metabolism
00600 Sphingolipid metabolism
114144461
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
114144461
00604 Glycosphingolipid biosynthesis - ganglio series
114144461
00511 Other glycan degradation
114144461
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114144461
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114144461
Enzymes [BR:
xco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
114144461
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114144461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
PUA_4
Plectin
Motif
Other DBs
NCBI-GeneID:
114144461
NCBI-ProteinID:
XP_027873130
LinkDB
All DBs
Position
5:complement(16526574..16534592)
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AA seq
654 aa
AA seq
DB search
MSVLRFNSVFLLLLLLMVLGHSNGTAPSFSVDYENNCFRKDGEQFRYISGSIHYSRIPRA
YWKDRLLKMYMAGLNAIQTYIPWNYHEETPGQYNFSEDRDVEYFLKLAQDIGLLVILRPG
PYICGEWDMGGLPAWLLKKKNIVLRSSDPDYIAAVDKWMGKLLPMMKPYLYQNGGPIITV
QVENEYGSYFACDYNYMRHLTKVFRAQLGDEVVLFTTDGAGVNYLKCGSIQGLYATVDFG
SGANITAAFAAQRHAEPYGPLVNSEFYTGWLDHWGSRHSVVSSAVVAKSLSQMLAVEANV
NLYMFIGGSNFGYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFAIRDVIRMYSKVPEG
PIPPATPKYAYGSVKMQKLQTVLSAVETLSFSGPVKSTYPQTFIDLNQDFGFVLYRTTLP
VNCSQPTPLSSPLNGVHDRAYVSVDGVAVGVLERNKVLSVNVTGKAGSQVDILVENMGRI
NFGKDINDFKGLVSNLNLGQTPLTGWTMYSLSIDEAVRQGLLGEQSPTQRDPDQPATLSL
PAFYNGSFIIPDGIPDLPQDTYVKLPGWKKGQIWINGFNLGRYWPARGPQVTLFVPASIL
STAAPNNVTILELEADPCSSQPCTIEFTTTPILNAPVLSEPKPRRRLFTTEDFL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgctccgatttaacagcgtctttctgctgctgctgcttctgatggtgcttgga
cactctaacgggacggctccatcattcagcgtggactacgaaaacaactgtttccgtaag
gatggggaacaatttcgttacatatcaggaagcatccactacagcaggatccccagggcc
tactggaaggaccggctgctaaagatgtacatggcaggactgaacgccatccagacctac
attccctggaactaccatgaagagactcctggccagtacaatttcagcgaagacagagat
gtggaatattttcttaagttggctcaggacatcggtctgttggtgattcttcgtccaggg
ccgtacatatgtggagagtgggacatggggggtctgcctgcatggcttctcaaaaaaaaa
aacattgtgctgcgatcgtctgaccccgattacattgcagctgtggataaatggatgggg
aagctgttacccatgatgaagccttacctctatcagaacggaggtccgatcatcactgta
caggtggagaatgaatatggcagctactttgcctgtgactacaactacatgcgtcaccta
accaaagtgttcagagctcaactgggagacgaggtggtgctgttcaccacagatggtgcc
ggggtgaattacctaaagtgtggctcaatacaaggcctctatgccactgtagactttggt
tccggtgcaaatataactgctgcctttgcagcacagcgacatgctgaaccttatgggcct
ttggtgaactctgagttttacactggatggctggaccactggggatcccgtcactctgtc
gtgtcgtccgctgtagtggccaagtccctcagccagatgctggctgtggaagcaaatgtt
aacctgtacatgttcataggcgggtcaaactttggctactggaatggtgcaaactctcca
tatgctgcacagcccacaagctatgactatgacgcccctctgtcagaggcaggagatctc
acagagaaatactttgccatcagagacgttatcagaatgtacagtaaggtaccggaggga
ccgattccaccagcaacaccaaagtatgcgtacggttctgttaaaatgcagaagctccag
acagtattaagtgccgtagaaacgctgtcattctcaggtccagttaaaagcacctatcct
cagacgttcattgacttaaatcaggactttggctttgttctgtatagaacgaccctgcct
gttaattgcagccaacccacccctctgtcatcacctctgaatggggtccatgatagagca
tatgtatcagtggacggggtggcagtaggggttctggaaaggaacaaggtcttgagtgtg
aatgtgacaggaaaggctggaagtcaggtggacattctggtggaaaacatgggccgaatc
aattttggaaaagacatcaatgacttcaagggactggtgtccaatcttaatctgggacaa
accccccttaccggctggaccatgtacagtcttagcatcgacgaggcggtcagacagggc
ctcctcggagaacaatctcccacacaaagagatccagatcagcctgcgactctttcgctt
cccgctttctataatggaagcttcatcattcctgatggtattcctgacctccctcaagac
acttatgtcaagctgccaggctggaagaaggggcagatctggattaacggttttaattta
gggcgttactggcccgctcgaggccctcaggtgacactttttgtgcctgccagcatcttg
agcacagcagcacccaacaatgtgaccatcctggagctggaagcagatccatgcagctcc
cagccatgcacaattgagtttacaaccacaccgatcctcaatgcaccagtcctctctgaa
cccaaaccgcgcaggagactgtttactacagaggatttcctgtga
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