Xiphophorus couchianus (Monterrey platyfish): 114144992
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Entry
114144992 CDS
T05908
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
114144992
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114144992
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114144992
Ion channels [BR:
xco04040
]
Ligand-gated channels
Glutamate (ionotropic)
114144992
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
114144992
NCBI-ProteinID:
XP_027874092
LinkDB
All DBs
Position
5:complement(12073207..12196434)
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AA seq
1759 aa
AA seq
DB search
MFKGRHLQFSTMLVSLRHSPSHLQDKCLVSPSSTRHSPPPLDQSCHHSQRQPRLTLPFLS
LSLSLLLLSVLLLPICEPRRVGGPGTGPGGSPGGQGGQRGGGNQRGAVIPPHYSPGSPAL
PPNAPKLISSLSIAVILVGNSSEVTLGAGLEKEDFLHIPYPPKVEVVTMNETDPKSIINR
ICAQMMRNSLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKDDHSMFF
QFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFINKVRSTIENSFVGWELEEVII
LDMSVDDGDSKIQNQMKKLQSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWIVPSLVAG
DADHVPSVFPIGLISVSYDEWDYNIEARVRDAVAVIATATSTMMLDRGKQTLQKSSCLGT
PDKKGSSIGHSKEILKYVMNVTFEGRNLSFSEKGHQMFPKLVIILLDKDRQWDRVGKWER
GSLTMRYHVWPRFELYSDVEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQL
KLSNHTGDSGIYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKVNGTWNGMVGE
VVAKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWV
MMFVMLLIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAVWLLWGLVFNNSVPV
QNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQKPNEFSPP
FRFGTVPNGSTERNIRNNYRDMHAYMTSFHQKNVDEALYSLKTGKLDAFIYDAAVLNYMA
GRDEGCKLVTIGSGKVFASTGYGIAIQKGSGWKRAVDLAILMLFGDGDMEEFEALWLTGI
CHNEKNEVMSSQLDVDNMAGVFYMLGAAMVLSLITFICEHLFYWQLRFCFMGVCSGKPGV
TFSISRGIYSCIHGVHIEENKSTIDSPSSTIKKNMNNTHSNILRLLRTAKDMTAVPGVNG
SPHAALEYSHSSREAAIYDIQKHRHSLVGHPADCKSAPPYLPEDPMFSDYISEVERTFGN
MPLKDSNLYQDHYRHHHPASALGMSGPPPNRPRSLGSASSLEGGMFDADSLGGGVAPIFT
TQPRPSMTHRNTSKFDLIAGHAAADTNQGGFKGSNVYGRFSFKGGASSTGLIGGHDRYCG
GGGGGSGGDDGNIRSDVSDISTHTVTYGNLEGSTKRRKQYRDSLKKRPASAKVRREQDEI
ELNAFRKRPHHHTVHHHFPHGPLAHRPVSPPLERKRGGGTGNSSPYIFRKDKDNLRDFYA
DQFRSKEGKAKWEQEGGSGGSGAGGGSGGGICKSLVPVEDFLKGKGKKTECKGGIGGMSA
GQQAHTCWEKGVSGLGGGGIAGGDWECRNCHTVCHHSGGGGSTCSASGVGGSGSRPSSAT
LCKRCDSCKIQPSNLYNISEDNNMIFSGVKSSIGPSQTQTQTQRRKLGPGGKVLRRQHSY
DTFVDLQREGAGRMGGVGGGIGGQFVQPRSVSLKEKDRYMEGPSPYAHMFERYSGERESP
MFGGIGGDRAAGGSSFSLYRGGEGGLHRRSVGERDLRDRDRNMMGGGGCGGGGGNRGAGT
YSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKPYYIKKPQTQQQQLLNNSRGGGDFRGSM
GATSYLPASATAGVMSNVATRYPKELCLGGVGGPMGNHHGANKLLSGGRDTLGLGQGQRP
FNGANGHVYEKLSSIESDV
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggacgacatttacaattctccacgatgcttgtcagcctccgccattctccc
tcccatcttcaggacaagtgtttggtgtctccctcctcaactcggcactctcctcctcct
ctggaccagtcgtgccatcactctcaacgccagccacggctcaccctgccctttctgtcc
ttgtccttgtctctgctcctactctccgtactcctgttgcccatctgcgaaccccggaga
gttggggggccaggaacggggcctggaggttccccaggtggacaaggaggtcagagagga
ggcggaaaccagaggggcgctgttatccctcctcattactctccgggttcgccagcactt
cctcctaacgcccccaaactgatcagctcgctcagcattgccgtcatcctggtgggcaat
tccagtgaagtaacccttggtgcaggacttgagaaagaggacttcctccacatcccttat
ccccctaaagttgaggtggtcaccatgaatgagacggacccgaagagcatcattaaccgg
atctgtgcgcagatgatgaggaactctctacaaggcgtagtgtttggtgacgacacggac
caggaggccatcgctcagatcctggacttcatctctgctcagacacacattcccatcctg
gggatccgagggggatcgtccatggtcatggctgccaaggatgaccactccatgttcttc
cagtttggcccctccattgagcagcaggcgtccgtcatgttgaacattatggaggagtat
gactggtacatattttctatcgtcaccacatactaccccgggtaccaggactttatcaac
aaggtacgcagcacaattgagaacagctttgtgggttgggagcttgaagaagtcatcata
ttagacatgtctgtggatgatggagactccaagatccagaatcagatgaagaagctgcag
agtccagttatcctgctctactgcaccaaggaggaagcgaccaccatttttgaagtggcc
cactccgtaggcctgacaggttatggctacacctggatcgtaccttcgctggtggccggt
gatgcagaccacgttccatctgtcttccctatagggctcatctctgtgtcgtatgacgaa
tgggactacaacatcgaggccagagtacgtgacgcagtggctgtcattgccacggcaacc
tcaaccatgatgttggaccgagggaaacagaccctgcagaagtccagttgccttgggacg
cctgacaaaaagggctccagcatcggccactccaaggaaatcttaaagtacgtcatgaat
gtgacatttgaaggtcgaaacctgtcatttagcgaaaaaggccaccagatgttccctaaa
ctagtcataatacttctcgacaaggaccggcaatgggacagggttggcaagtgggaaaga
ggctcattgacgatgaggtaccatgtgtggcctcgtttcgagctgtactctgacgtggag
gagcgggaggaccacctgtccatcgtgactctggaggaggcgccatttgtcattgtggag
gacgtggatccactcagtgggacatgcatgaggaacactgtgccgtgtcggaaacagctg
aaactcagcaatcacacaggcgattcagggatttacatcaaacgctgctgtaaaggcttc
tgtatcgacatcctgaaaaagattgcgaaaactgtcaagttcacttacgacctgtattta
gttaccaatggtaaacacggcaagaaggttaatgggacctggaacggcatggtgggagag
gtggtggcaaagaatgctcacatggccgtcggttccctcaccatcaacgaggagaggtca
gaggtcattgacttctccgtgccattcatcgagacgggtatcagtgtcatggtctcccgc
agcaacggcaccgtctccccctctgcctttctagagcccttcagcgctgatgtctgggtc
atgatgtttgtgatgctgctgatcgtgtcggccgtggctgtctttgtgttcgagtacttc
agcccggtgggttacaatcgctgtctggcagacggacgagagcccggcggtccctccttc
accatcggcaaggccgtctggctgctgtggggcctggttttcaacaactccgttcctgtg
cagaatcccaaaggcaccacgagtaagatcatggtgtcagtgtgggccttcttcgctgtc
atctttctggcctcctacactgccaatctggctgccttcatgatccaggaggaatatgtg
gaccaggtgtcgggcttgtcagacaaaaagttccagaagccgaatgagttctctccgcct
ttccggtttggtacggtgcccaacgggagcacagagcgcaacatccgcaacaactacaga
gacatgcacgcctacatgaccagcttccaccagaagaatgtagatgaagccctgtacagc
ctgaagactgggaaactggatgccttcatctatgacgcagcagtgctaaactatatggct
ggcagggatgagggctgtaagctggtaaccattgggagcggcaaagtgttcgcctccaca
ggctacggcatcgccatccagaagggctcgggttggaaacgagccgtggatctggctatc
ctcatgttgtttggagatggtgatatggaggagttcgaggccctgtggctgacaggaatc
tgtcacaacgagaagaacgaggtgatgagcagccagctggacgtagacaacatggcaggg
gtcttctacatgctcggggctgccatggttctgtcactgatcaccttcatctgtgaacat
ttgttctactggcagctgcgtttctgcttcatgggcgtgtgctcggggaagcccggggtc
acgttctccatcagcagaggtatctacagctgcatccatggggtacatatcgaagaaaac
aagtcaaccattgactcaccatcttctaccataaagaagaacatgaacaacacccactcc
aacatcctacggttacttcgaactgctaaggacatgactgcagtcccaggcgttaatggc
tctccacatgcagccctagagtatagccacagtagccgtgaagcggccatctatgacatc
cagaagcaccggcatagcctagtgggtcaccctgcagattgtaagtctgctccgccctat
cttccagaggatcccatgttcagtgattatatcagcgaggtggagaggacttttggcaac
atgcccctgaaggacagcaacctctaccaggaccattaccggcaccaccacccggcctcg
gctctgggtatgtccggccccccacccaataggccgcgtagcttaggcagcgctagctca
ttggaaggtggcatgttcgatgctgacagtttggggggaggggtagcacccattttcacc
acccagccccgcccctcaatgactcacaggaatacaagtaaatttgacctgattgcaggc
cacgccgctgcagataccaatcagggtgggttcaaaggaagcaatgtttacgggaggttt
tctttcaaaggaggagcatccagcactgggctcatcgggggacacgacaggtactgtggt
gggggagggggaggctcagggggtgacgatgggaatattcgctctgatgtgtcggacatc
tccacgcacactgttacctatggaaacctggagggcagcaccaagaggcgtaagcagtac
agggacagcctgaaaaagaggccagcctccgcgaaggtcagacgggagcaggacgagata
gagctgaacgccttcaggaagagaccccaccaccacaccgtccaccaccacttcccccat
gggcctctggcacaccgcccggtctcacctcccctggagcggaagaggggaggaggaacg
ggtaattcttcaccttacatattccgcaaagacaaagacaacctgagggatttctatgcg
gaccagttccgctccaaggagggcaaggccaagtgggagcaagagggtggaagtggagga
agcggtgcaggcggtggtagtggtggtggtatctgtaaaagcttagtgcctgtggaagac
ttcctcaaaggtaaagggaagaaaacagagtgcaaaggtggcattggtggaatgtcagca
gggcaacaggctcatacttgctgggagaaaggagtttctggccttggagggggaggaata
gcagggggtgactgggagtgtcgtaactgccacactgtttgtcatcacagtggaggagga
ggcagcacgtgctcagctagtggagttggggggagtggcagtcgccccagctctgctacg
ctctgcaaacgctgtgactcctgcaagatacagccaagcaacctttataacatcagtgag
gataacaacatgatttttagtggtgtgaagagcagcataggacctagtcagacacagact
cagacacagcgcaggaaactagggccaggcgggaaggtgttacggaggcagcactcttac
gatacatttgtagatctgcagagagagggagctggtcgcatgggtggggttggaggcggt
attggcgggcagtttgttcagccccgaagtgtgagtttgaaagaaaaagaccgttacatg
gagggccccagtccctatgcacacatgtttgagagatattcgggtgaaagggaatctccc
atgtttgggggaataggtggggatagagcagcaggagggtcctccttcagtttgtaccgt
ggaggagaaggtgggttgcatcgacgttcagtgggggagagagacctgagggacagagac
agaaatatgatgggaggagggggctgtggtggtggtggtggtaacagaggggctgggact
tactccttgtctaaatctctttacccagataaggtgaaccagaaccccttcatcccaacc
ttcggtgacgaccagtgtctattacacggtgccaaaccgtactacatcaaaaagccacag
acgcagcagcagcaacttctcaacaacagccgaggaggaggggacttccgcggctccatg
ggagcgacttcctatttgcccgcatctgccacagctggggtgatgtccaatgtggccaca
aggtaccccaaagagctgtgcctgggtggggtgggaggacccatggggaaccaccacggg
gccaacaaactgctgtccggaggcagggacacgttaggtctgggacagggacagagaccc
ttcaatggtgccaatggacacgtttatgaaaagctctcgagcattgagtcagatgtctga
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